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    PF3D7_1420000 splicing factor 3B subunit 4, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 811775, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1420000
    Gene description
    splicing factor 3B subunit 4, putative
    Locus tag
    PF3D7_1420000
    See related
    PlasmoDB:PF3D7_1420000; VEuPathDB:PF3D7_1420000
    Gene type
    protein coding
    RNA name
    splicing factor 3B subunit 4, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1420000 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    3
    Sequence:
    Chromosome: 14; NC_037283.1 (828904..830773, complement)

    Chromosome 14 - NC_037283.1Genomic Context describing neighboring genes Neighboring gene glutathione reductase Neighboring gene cleavage and polyadenylation specificity factor subunit 4, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene myosin-specific chaperone UNC, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037283.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
    2. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Process Evidence Code Pubs
    acts_upstream_of_or_within RNA splicing ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    acts_upstream_of_or_within RNA splicing, via transesterification reactions ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    acts_upstream_of_or_within mRNA splicing, via spliceosome ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    part_of spliceosomal complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    splicing factor 3B subunit 4, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037283.1 Reference assembly

      Range
      828904..830773 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001348331.1 → XP_001348367.1  splicing factor 3B subunit 4, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001348367.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2I0C2L0, Q8ILQ0
      Conserved Domains (2) summary
      TIGR01628
      Location:20 → 199
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
      cl17169
      Location:106 → 186
      RRM_SF; RNA recognition motif (RRM) superfamily
    Nucleotide Protein
    Heading Accession and Version

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