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    PF3D7_0219500 pseudouridine synthase, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 812778, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0219500
    Gene description
    pseudouridine synthase, putative
    Locus tag
    PF3D7_0219500
    See related
    PlasmoDB:PF3D7_0219500; VEuPathDB:PF3D7_0219500
    Gene type
    protein coding
    RNA name
    pseudouridine synthase, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0219500 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_037280.1 (776828..778065, complement)

    Chromosome 2 - NC_037280.1Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene ribosome associated membrane protein RAMP4, putative Neighboring gene replication factor C subunit 1, putative Neighboring gene Plasmodium exported protein (PHISTc), unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037280.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A network-based approach reveals novel invasion and Maurer's clefts-related proteins in Plasmodium falciparum. Das D, et al. Mol Omics, 2019 Dec 2. PMID 31631203
    2. Chromosome 2 sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Science, 1998 Nov 6. PMID 9804551
    3. Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites. Boucher MJ, et al. PLoS Biol, 2018 Sep. PMID 30212465, Free PMC Article
    4. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Component Evidence Code Pubs
    located_in Maurer's cleft RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in apicoplast HDA PubMed 

    General protein information

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    Preferred Names
    pseudouridine synthase, putative
    XP_001349696.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037280.1 Reference assembly

      Range
      776828..778065 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001349660.1 → XP_001349696.1  pseudouridine synthase, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001349696.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024VDX8, A0A024WEF3, A0A024WWI2, A0A024XF78, A0A0L0D001, A0A0L1IFT9, A0A0L7KCV5, A0A0L7M3V7, O96270, W4I6G8, W4J7P9, W7FMJ1, W7FNL9, W7JVU3, W7K0Q1
      Conserved Domains (1) summary
      COG1187
      Location:47 → 334
      RsuA; 16S rRNA U516 pseudouridylate synthase RsuA and related 23S rRNA U2605, pseudouridylate synthases [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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