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    PF3D7_0313100 ubiquitin-protein ligase, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 814446, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0313100
    Gene description
    ubiquitin-protein ligase, putative
    Locus tag
    PF3D7_0313100
    See related
    PlasmoDB:PF3D7_0313100; VEuPathDB:PF3D7_0313100
    Gene type
    protein coding
    RNA name
    ubiquitin-protein ligase, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0313100 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_000521.4 (539743..542810)

    Chromosome 3 - NC_000521.4Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene conserved protein, unknown function Neighboring gene YGGT family protein, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000521.4

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum. Bowman S, et al. Nature, 1999 Aug 5. PMID 10448855
    2. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
    3. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    ubiquitin-protein ligase, putative
    XP_001351202.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000521.4 Reference assembly

      Range
      539743..542810
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351166.3 → XP_001351202.1  ubiquitin-protein ligase, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001351202.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0L7KB57, A0A2I0BTI8, O77341, W4INH9
      Conserved Domains (2) summary
      COG0790
      Location:452 → 731
      TPR; TPR repeat [Signal transduction mechanisms]
      sd00010
      Location:434 → 463
      SLR; SLR repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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