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    PF3D7_0401600.1 rifin [ Plasmodium falciparum 3D7 ]

    Gene ID: 812534, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0401600.1
    Gene description
    rifin
    Locus tag
    PF3D7_0401600.1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Old locus tag
    PF3D7_0401600.2
    Orthologs
    all
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    Genomic context

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    See PF3D7_0401600.1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_004318.2 (92576..93809, complement)

    Chromosome 4 - NC_004318.2Genomic Context describing neighboring genes Neighboring gene rifin Neighboring gene pseudo Neighboring gene pseudo Neighboring gene Plasmodium exported protein (PHISTb), unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004318.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Plasmodium falciparum RIFIN is a novel ligand for inhibitory immune receptor LILRB2. Sakoguchi A, et al. Biochem Biophys Res Commun, 2021 Apr 9. PMID 33647792
    2. In vitro selection for adhesion of Plasmodium falciparum-infected erythrocytes to ABO antigens does not affect PfEMP1 and RIFIN expression. van der Puije W, et al. Sci Rep, 2020 Jul 30. PMID 32732983, Free PMC Article
    3. Small variant STEVOR antigen is uniquely located within Maurer's clefts in Plasmodium falciparum-infected red blood cells. Kaviratne M, et al. Eukaryot Cell, 2002 Dec. PMID 12477793, Free PMC Article
    4. Sequence of Plasmodium falciparum chromosomes 2, 10, 11 and 14. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368868
    5. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Plasmodium falciparum RIFIN is a novel ligand for inhibitory immune receptor LILRB2.
      Title: Plasmodium falciparum RIFIN is a novel ligand for inhibitory immune receptor LILRB2.
    2. In vitro selection for adhesion of Plasmodium falciparum-infected erythrocytes to ABO antigens does not affect PfEMP1 and RIFIN expression.
      Title: In vitro selection for adhesion of Plasmodium falciparum-infected erythrocytes to ABO antigens does not affect PfEMP1 and RIFIN expression.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Component Evidence Code Pubs
    located_in Maurer's cleft TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rifin

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004318.2 Reference assembly

      Range
      92576..93809 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024473326.1 → XP_024328993.1  rifin [Plasmodium falciparum 3D7]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A143ZXC7, A0A2I0BZR7, W7FII8
      Conserved Domains (1) summary
      cl14106
      Location:25 → 344
      RIFIN; Rifin

    2. XM_001351294.1 → XP_001351330.1  rifin [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001351330.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q8I209, W7FII8, W7KA93
      Conserved Domains (1) summary
      cl14106
      Location:26 → 345
      RIFIN; Rifin
    Nucleotide Protein
    Heading Accession and Version

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