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    PF3D7_0405300 liver specific protein 2, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 812430, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0405300
    Gene description
    liver specific protein 2, putative
    Locus tag
    PF3D7_0405300
    See related
    PlasmoDB:PF3D7_0405300; VEuPathDB:PF3D7_0405300
    Gene type
    protein coding
    RNA name
    liver specific protein 2, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0405300 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_004318.2 (282403..288297, complement)

    Chromosome 4 - NC_004318.2Genomic Context describing neighboring genes Neighboring gene protein transport protein Sec24B, putative Neighboring gene ag-1 blood stage membrane protein homologue Neighboring gene pre-mRNA-processing-splicing factor 8, putative Neighboring gene conserved Plasmodium protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004318.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Liver-specific protein 2: a Plasmodium protein exported to the hepatocyte cytoplasm and required for merozoite formation. Orito Y, et al. Mol Microbiol, 2013 Jan. PMID 23216750
    2. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
    3. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Component Evidence Code Pubs
    located_in host cell cytoplasm ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 
    located_in host cell nucleus ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 
    located_in nucleus HDA PubMed 
    located_in symbiont-containing vacuole ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    liver specific protein 2, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004318.2 Reference assembly

      Range
      282403..288297 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351329.1 → XP_001351365.1  liver specific protein 2, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001351365.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024VVD6, A0A2I0BZR4, Q8I1X6
      Conserved Domains (2) summary
      COG1044
      Location:1798 → 1887
      LpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [Cell wall/membrane/envelope biogenesis]
      pfam17380
      Location:434 → 755
      DUF5401; Family of unknown function (DUF5401)
    Nucleotide Protein
    Heading Accession and Version

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