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    PF3D7_0414000 structural maintenance of chromosomes protein 3, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 812569, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0414000
    Gene description
    structural maintenance of chromosomes protein 3, putative
    Locus tag
    PF3D7_0414000
    See related
    PlasmoDB:PF3D7_0414000; VEuPathDB:PF3D7_0414000
    Gene type
    protein coding
    RNA name
    structural maintenance of chromosomes protein 3, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0414000 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    21
    Sequence:
    Chromosome: 4; NC_004318.2 (626891..633126, complement)

    Chromosome 4 - NC_004318.2Genomic Context describing neighboring genes Neighboring gene 50S ribosomal protein L10, putative Neighboring gene ubiquitin carboxyl-terminal hydrolase 13, putative Neighboring gene conserved Plasmodium membrane protein, unknown function Neighboring gene calmodulin-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004318.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The chromatin bound proteome of the human malaria parasite. Batugedara G, et al. Microb Genom, 2020 Feb. PMID 32017676, Free PMC Article
    2. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    3. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
    4. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables chromatin binding HDA PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chromosome, centromeric region IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nuclear periphery IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus HDA PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    structural maintenance of chromosomes protein 3, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004318.2 Reference assembly

      Range
      626891..633126 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351412.1 → XP_001351448.1  structural maintenance of chromosomes protein 3, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001351448.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q8I1U7
      UniProtKB/TrEMBL
      A0A0L1I5D4, A0A2I0BZL8, W4IM41, W7FV89
      Conserved Domains (1) summary
      COG1196
      Location:1 → 1184
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8I1U7.1

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