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    PF3D7_0413600 26S protease regulatory subunit 6B, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 812570, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0413600
    Gene description
    26S protease regulatory subunit 6B, putative
    Locus tag
    PF3D7_0413600
    See related
    PlasmoDB:PF3D7_0413600; VEuPathDB:PF3D7_0413600
    Gene type
    protein coding
    RNA name
    26S protease regulatory subunit 6B, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0413600 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_004318.2 (616914..618350, complement)

    Chromosome 4 - NC_004318.2Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene phosphoglucomutase-2 Neighboring gene lysine decarboxylase-like protein, putative Neighboring gene 50S ribosomal protein L10, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004318.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
    2. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    3. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
    4. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by GeneDB

    Process Evidence Code Pubs
    acts_upstream_of_or_within proteasome regulatory particle assembly ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    acts_upstream_of_or_within ubiquitin-dependent protein catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus HDA PubMed 
    part_of proteasome regulatory particle, base subcomplex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    26S protease regulatory subunit 6B, putative
    XP_001351444.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004318.2 Reference assembly

      Range
      616914..618350 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351408.1 → XP_001351444.1  26S protease regulatory subunit 6B, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001351444.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024VFN2, A0A0L1I443, A0A0L7KF54, A0A0L7M432, Q8I1V1, W7FKV6, W7JYX2
      Conserved Domains (1) summary
      PTZ00454
      Location:1 → 391
      PTZ00454; 26S protease regulatory subunit 6B-like protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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