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    PF3D7_0519500 CCR4 domain-containing protein 1, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 813011, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0519500
    Gene description
    CCR4 domain-containing protein 1, putative
    Locus tag
    PF3D7_0519500
    See related
    PlasmoDB:PF3D7_0519500; VEuPathDB:PF3D7_0519500
    Gene type
    protein coding
    RNA name
    CCR4 domain-containing protein 1, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0519500 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_004326.2 (801450..809127, complement)

    Chromosome 5 - NC_004326.2Genomic Context describing neighboring genes Neighboring gene protoheme IX farnesyltransferase, putative Neighboring gene 40S ribosomal protein S24 Neighboring gene zinc finger protein, putative Neighboring gene FoP domain-containing protein, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004326.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Plasmodium male gametocyte development and transmission are critically regulated by the two putative deadenylases of the CAF1/CCR4/NOT complex. Hart KJ, et al. PLoS Pathog, 2019 Jan. PMID 30703164, Free PMC Article
    2. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
    3. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Component Evidence Code Pubs
    part_of CCR4-NOT complex ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CCR4 domain-containing protein 1, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004326.2 Reference assembly

      Range
      801450..809127 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351717.1 → XP_001351753.1  CCR4 domain-containing protein 1, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001351753.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0L7KI08, Q8I3R5
      Conserved Domains (2) summary
      PLN03144
      Location:1439 → 1614
      PLN03144; Carbon catabolite repressor protein 4 homolog; Provisional
      cl00490
      Location:2120 → 2485
      EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily
    Nucleotide Protein
    Heading Accession and Version

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