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    PF3D7_0827800 SET domain protein, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 2655461, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0827800
    Gene description
    SET domain protein, putative
    Locus tag
    PF3D7_0827800
    See related
    PlasmoDB:PF3D7_0827800; VEuPathDB:PF3D7_0827800
    Gene type
    protein coding
    RNA name
    SET domain protein, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0827800 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    1
    Sequence:
    Chromosome: 8; NC_004329.3 (1198858..1206057)

    Chromosome 8 - NC_004329.3Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene magnesium transporter, putative Neighboring gene protein disulfide isomerase Neighboring gene rhomboid protease ROM3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004329.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Epigenetic inhibitors target multiple stages of Plasmodium falciparum parasites. Coetzee N, et al. Sci Rep, 2020 Feb 11. PMID 32047203, Free PMC Article
    2. Potential epigenetic regulatory proteins localise to distinct nuclear sub-compartments in Plasmodium falciparum. Volz J, et al. Int J Parasitol, 2010 Jan. PMID 19765590
    3. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Process Evidence Code Pubs
    acts_upstream_of_or_within response to xenobiotic stimulus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nuclear periphery IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    SET domain protein, putative
    XP_001349248.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004329.3 Reference assembly

      Range
      1198858..1206057
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001349212.1 → XP_001349248.1  SET domain protein, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001349248.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0L1I6Y6, A0A8S9VVT9, Q8IBB0
      Conserved Domains (3) summary
      cl40432
      Location:2231 → 2379
      SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily
      pfam05033
      Location:2134 → 2182
      Pre-SET; Pre-SET motif
      cl02620
      Location:1756 → 1795
      SAD_SRA; SAD/SRA domain
    Nucleotide Protein
    Heading Accession and Version

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