U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Gm26688 predicted gene, 26688 [ Mus musculus (house mouse) ]

    Gene ID: 102633805, updated on 17-Aug-2024

    Summary

    Official Symbol
    Gm26688provided by MGI
    Official Full Name
    predicted gene, 26688provided by MGI
    Primary source
    MGI:MGI:5477182
    See related
    Ensembl:ENSMUSG00000097752 AllianceGenome:MGI:5477182
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Tfap2a-as1
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Gm26688 in Genome Data Viewer
    Location:
    13 A3.3; 13
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (40881284..40888638)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (40727808..40735162)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S10 pseudogene Neighboring gene STARR-seq mESC enhancer starr_34273 Neighboring gene STARR-seq mESC enhancer starr_34274 Neighboring gene STARR-seq mESC enhancer starr_34275 Neighboring gene STARR-seq mESC enhancer starr_34276 Neighboring gene predicted gene 9979 Neighboring gene transcription factor AP-2, alpha Neighboring gene UBX domain protein 2A pseudogene Neighboring gene STARR-seq mESC enhancer starr_34280 Neighboring gene STARR-seq mESC enhancer starr_34281 Neighboring gene oogenesin 2 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_125899.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC123834, AK017409
      Related
      ENSMUST00000181176.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      40881284..40888638
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)