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    astB N-succinylarginine dihydrolase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946259, updated on 3-Dec-2024

    Summary

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    Official Symbol
    astB
    Official Full Name
    N-succinylarginine dihydrolase
    Primary source
    ECOCYC:G6941
    Locus tag
    b1745
    See related
    ASAP:ABE-0005817
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1743; ydjT
    Summary
    The subunit structure has not been determined. [More information is available at EcoCyc: G6941].
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    Genomic context

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    Sequence:
    NC_000913.3 (1826916..1828259, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene excinuclease Cho Neighboring gene HutD family protein Ves Neighboring gene ATP-independent periplasmic chaperone Neighboring gene succinylglutamate desuccinylase Neighboring gene aldehyde dehydrogenase Neighboring gene arginine N-succinyltransferase Neighboring gene succinylornithine transaminase Neighboring gene exodeoxyribonuclease III

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Crystal structure of N-succinylarginine dihydrolase AstB, bound to substrate and product, an enzyme from the arginine catabolic pathway of Escherichia coli. Tocilj A, et al. J Biol Chem, 2005 Apr 22. PMID 15703173
    2. ArgR-independent induction and ArgR-dependent superinduction of the astCADBE operon in Escherichia coli. Kiupakis AK, et al. J Bacteriol, 2002 Jun. PMID 12003934, Free PMC Article
    3. Arginine catabolism and the arginine succinyltransferase pathway in Escherichia coli. Schneider BL, et al. J Bacteriol, 1998 Aug. PMID 9696779, Free PMC Article
    4. Prediction of the structure and function of AstA and AstB, the first two enzymes of the arginine succinyltransferase pathway of arginine catabolism. Shirai H, et al. FEBS Lett, 2003 Dec 18. PMID 14675764
    5. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. possesses a flexible loop that is disordered in the absence of substrate and assumes an ordered conformation upon substrate binding
      Title: Crystal structure of N-succinylarginine dihydrolase AstB, bound to substrate and product, an enzyme from the arginine catabolic pathway of Escherichia coli.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables N-succinylarginine dihydrolase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables N-succinylarginine dihydrolase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables N-succinylarginine dihydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein homodimerization activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in arginine catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    acts_upstream_of_or_within arginine catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in arginine catabolic process to glutamate IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in arginine catabolic process to succinate IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in arginine metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    N-succinylarginine dihydrolase
    NP_416259.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1826916..1828259 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416259.1 N-succinylarginine dihydrolase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416259.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8T5ZUM1
      Conserved Domains (1) summary
      PRK13281
      Location:1 → 441
      PRK13281; N-succinylarginine dihydrolase
    Nucleotide Protein
    Heading Accession and Version

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