U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    gltF periplasmic protein GltF [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947746, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    gltF
    Official Full Name
    periplasmic protein GltF
    Primary source
    ECOCYC:EG11514
    Locus tag
    b3214
    See related
    ASAP:ABE-0010549
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3204; ossB
    Summary
    Although the GltF protein was overproduced using foreign translation signals, the detection of a signal peptide cleavage verifies the mature protein N-terminus. [More information is available at EcoGene: EG11514]. gltF belongs to an operon with genes for the large and small subunits of glutamate synthase, gltB and gltD . [More information is available at EcoCyc: EG11514].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (3361176..3361940)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene glutamate synthase subunit GltB Neighboring gene glutamate synthase subunit GltD Neighboring gene putative fimbrial chaperone YhcA Neighboring gene putative fimbrial usher protein YhcD Neighboring gene pseudo

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Activation from a distance: roles of Lrp and integration host factor in transcriptional activation of gltBDF. Paul L, et al. J Bacteriol, 2001 Jul. PMID 11395454, Free PMC Article
    2. Characterization of the gltF gene product of Escherichia coli. Grassl G, et al. FEMS Microbiol Lett, 1999 Oct 1. PMID 10481090
    3. The leucine-responsive regulatory protein, a global regulator of metabolism in Escherichia coli. Calvo JM, et al. Microbiol Rev, 1994 Sep. PMID 7968922, Free PMC Article
    4. Roles of glutamate synthase, gltBD, and gltF in nitrogen metabolism of Escherichia coli and Klebsiella aerogenes. Goss TJ, et al. J Bacteriol, 2001 Nov. PMID 11673431, Free PMC Article
    5. gltBDF operon of Escherichia coli. Castaño I, et al. J Bacteriol, 1988 Feb. PMID 2448295, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. N-terminus verified by Edman degradation on mature peptide
      Title: Characterization of the gltF gene product of Escherichia coli.
    Submit: New GeneRIF Correction

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in outer membrane-bounded periplasmic space IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    periplasmic protein GltF

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3361176..3361940
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417681.1 periplasmic protein GltF [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417681.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A377DKR7
      Conserved Domains (1) summary
      pfam06551
      Location:33 → 146
      DUF1120; Protein of unknown function (DUF1120)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.