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    ygaP thiosulfate sulfurtransferase YgaP [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947135, updated on 17-Dec-2024

    Summary

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    Official Symbol
    ygaP
    Official Full Name
    thiosulfate sulfurtransferase YgaP
    Primary source
    ECOCYC:G7398
    Locus tag
    b2668
    See related
    ASAP:ABE-0008786
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2662
    Summary
    YgaP has a rhodanese domain and sulfur transferase (rhodanese) activity in vitro, F. [More information is available at EcoGene: EG13288]. YgaP is an inner membrane protein with two predicted transmembrane domains. [More information is available at EcoCyc: G7398].
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    Genomic context

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    Sequence:
    NC_000913.3 (2797520..2798044)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene Pmp3 family protein YqaE Neighboring gene putative DNA-binding transcriptional regulator YgaV Neighboring gene DNA-binding transcriptional repressor StpA with RNA chaperone activity Neighboring gene L-alanine exporter

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. S-Nitrosylation Induces Structural and Dynamical Changes in a Rhodanese Family Protein. Eichmann C, et al. J Mol Biol, 2016 Sep 25. PMID 27473602, Free PMC Article
    2. The ygaVP genes of Escherichia coli form a tributyltin-inducible operon. Gueuné H, et al. Appl Environ Microbiol, 2008 Mar. PMID 18245262, Free PMC Article
    3. Nucleotide sequence of a newly-identified Escherichia coli gene, stpA, encoding an H-NS-like protein. Zhang A, et al. Nucleic Acids Res, 1992 Dec 25. PMID 1480493, Free PMC Article
    4. Fast conformational exchange between the sulfur-free and persulfide-bound rhodanese domain of E. coli YgaP. Wang W, et al. Biochem Biophys Res Commun, 2014 Sep 26. PMID 25204500
    5. Solution NMR structure and functional analysis of the integral membrane protein YgaP from Escherichia coli. Eichmann C, et al. J Biol Chem, 2014 Aug 22. PMID 24958726, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables thiosulfate sulfurtransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables thiosulfate sulfurtransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    thiosulfate sulfurtransferase YgaP
    NP_417154.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2797520..2798044
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417154.1 thiosulfate sulfurtransferase YgaP [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417154.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X1LLJ7, A0A2X1NYB6, A0A3K0WBS9
      Conserved Domains (2) summary
      cd01527
      Location:3 → 103
      RHOD_YgaP; Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.
      pfam11127
      Location:115 → 165
      DUF2892; Protein of unknown function (DUF2892)
    Nucleotide Protein
    Heading Accession and Version

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