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    TDA11 Tda11p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856564, updated on 9-Dec-2024

    Summary

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    Official Symbol
    TDA11
    Official Full Name
    Tda11p
    Primary source
    SGD:S000001202
    Locus tag
    YHR159W
    See related
    AllianceGenome:SGD:S000001202; FungiDB:YHR159W; VEuPathDB:YHR159W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in cytoplasm. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See TDA11 in Genome Data Viewer
    Location:
    chromosome: VIII
    Exon count:
    1
    Sequence:
    Chromosome: VIII; NC_001140.6 (417549..419063)

    Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene Rec104p Neighboring gene Kel1p Neighboring gene Pex18p Neighboring gene Yap1801p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001140.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The GET pathway is a major bottleneck for maintaining proteostasis in Saccharomyces cerevisiae. Josefson R, et al. Sci Rep, 2023 Jun 7. PMID 37286562, Free PMC Article
    2. The yeast LYST homolog Bph1 is a Rab5 effector and prevents Atg8 lipidation at endosomes. Vargas Duarte P, et al. J Cell Sci, 2022 Apr 15. PMID 35343566
    3. Targets of the cyclin-dependent kinase Cdk1. Ubersax JA, et al. Nature, 2003 Oct 23. PMID 14574415
    4. Reconstitution and protein composition analysis of endocytic actin patches. Michelot A, et al. Curr Biol, 2010 Nov 9. PMID 21035341, Free PMC Article
    5. Selective ploidy ablation, a high-throughput plasmid transfer protocol, identifies new genes affecting topoisomerase I-induced DNA damage. Reid RJ, et al. Genome Res, 2011 Mar. PMID 21173034, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Tda11p
    NP_012029.1
    • hypothetical protein; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; potential Cdc28p substrate; null mutant is sensitive to expression of the top1-T722A allele

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001140.6 Reference assembly

      Range
      417549..419063
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179290.1 → NP_012029.1  TPA: Tda11p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_012029.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B3LSS3, C7GJX9, C8Z9V6, D3DLA8, P38854
      UniProtKB/TrEMBL
      N1P9H1
      Conserved Domains (1) summary
      pfam17084
      Location:3 → 451
      TDA11; Topoisomerase I damage affected protein 11
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P38854.1

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