U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG33521 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3346141, updated on 17-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG33521provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0250819
    Locus tag
    Dmel_CG33521
    See related
    AllianceGenome:FB:FBgn0250819
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    2D9; anon-EST:fe2A9; anon-EST:fe2D9; anon-EST:fe2E7; anon2D9; BcDNA:RE73965; CG17467; CG32015; Dmel\CG33521
    Summary
    Predicted to be involved in actin cytoskeleton organization. Predicted to be active in cytoplasm. Is expressed in larval muscle system and larval somatic muscle cell. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG33521 in Genome Data Viewer
    Location:
    102F8-102F8; 4-0 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 4 NC_004353.4 (1185768..1192985)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 4 NC_004353.3 (1206394..1213611)

    Chromosome 4 - NC_004353.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Kinesin family member 3C Neighboring gene pleiohomeotic Neighboring gene Phosphatidylinositol 5-phosphate 4-kinase Neighboring gene mitf Neighboring gene Dual-specificity tyrosine phosphorylation-regulated kinase 3

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The Roles of the LIM Domain Proteins in Drosophila Cardiac and Hematopoietic Morphogenesis. She M, et al. Front Cardiovasc Med, 2021. PMID 33681304, Free PMC Article
    2. From genes to individuals: developmental genes and the generation of the phenotype. Tautz D, et al. Philos Trans R Soc Lond B Biol Sci, 1998 Feb 28. PMID 9533124, Free PMC Article
    3. Molecular mapping of deletion breakpoints on chromosome 4 of Drosophila melanogaster. Podemski L, et al. Chromosoma, 2004 Jun. PMID 15185094
    4. Fourth Chromosome Resource Project: a comprehensive resource for genetic analysis in Drosophila that includes humanized stocks. Stinchfield MJ, et al. Genetics, 2024 Feb 7. PMID 37981656, Free PMC Article
    5. A screen for fast evolving genes from Drosophila. Schmid KJ, et al. Proc Natl Acad Sci U S A, 1997 Sep 2. PMID 9275195, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    mobile_element

    • Loc: 1186859-1186960 mobile_element_type = transposon:INE-1{}3966
    • Loc: 1190793-1191283 mobile_element_type = transposon:INE-1{}3968

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    BcDNA:RE73965
    CG33521-PA
    CG33521-PC
    CG33521-PD
    CG33521-PG
    anon-fast-evolving-2A9
    anon-fast-evolving-2D9
    anon-fast-evolving-2E7

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004353.4 Reference assembly

      Range
      1185768..1192985
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001014705.3 → NP_001014705.1  uncharacterized protein Dmel_CG33521, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001014705.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q59DP3, Q8IGL8
      Conserved Domains (1) summary
      cl02475
      Location:66 → 122
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

    2. NM_001014703.3 → NP_001014703.1  uncharacterized protein Dmel_CG33521, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001014703.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q59DP4, Q8IGL8
      Conserved Domains (1) summary
      cd09445
      Location:80 → 136
      LIM_Mical_like_2; This domain belongs to the LIM domain family which are found on Mical (molecule interacting with CasL) like proteins

    3. NM_001258506.2 → NP_001245435.2  uncharacterized protein Dmel_CG33521, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001245435.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9XVQ0
      Conserved Domains (1) summary
      cl02475
      Location:80 → 136
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

    4. NM_001014702.4 → NP_001014702.1  uncharacterized protein Dmel_CG33521, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001014702.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q59DP3, Q8IGL8
      Conserved Domains (1) summary
      cl02475
      Location:66 → 122
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    H9XVQ0 H9XVQ0
    O16056 O16056
    Q59DP3 Q59DP3
    Q59DP4 Q59DP4
    Q5BIG1 Q5BIG1
    Q8IGL8 Q8IGL8
    Q8MSS5 Q8MSS5

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools