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    ck crinkled [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34882, updated on 9-Dec-2024

    Summary

    Official Symbol
    ckprovided by FlyBase
    Official Full Name
    crinkledprovided by FlyBase
    Primary source
    FLYBASE:FBgn0000317
    Locus tag
    Dmel_CG7595
    See related
    AllianceGenome:FB:FBgn0000317
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    53D10S; anon-35Bb; BG:DS00929.11; br27; CG7595; CK; ck/MyoVIIA; D; D2; Dm 35B; DM7a; Dmel\CG7595; DmVIIa; DmVIIA; DMyoVIIa; Dro35B; ESTS:53D10S; l(1)35Ca; l(2)07130; l(2)35Ca; l(2)br27; l35Ca; Mhc35BC; Myo7A; Myo7B; myosin-7a; myoVIIa; myoVIIA; MyoVIIA; stc; stch
    Summary
    Enables several functions, including ATP binding activity; cadherin binding activity; and plus-end directed microfilament motor activity. Involved in several processes, including chaeta morphogenesis; instar larval or pupal development; and plasma membrane bounded cell projection organization. Located in several cellular components, including basal cortex; chrorion micropyle; and female germline ring canal outer rim. Part of myosin VII complex. Colocalizes with actin cytoskeleton. Is expressed in several structures, including adult head; follicle cell; germarium; germline cell; and micropyle. Used to study auditory system disease and autosomal recessive nonsyndromic deafness 2. Human ortholog(s) of this gene implicated in Leber congenital amaurosis; Usher syndrome (multiple); auditory system disease (multiple); and congenital nystagmus. Orthologous to human MYO7A (myosin VIIA). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    35B8-35B9; 2-50 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (15044963..15057862, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (15044963..15057862, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene yellow-c Neighboring gene Cytokine induced apoptosis inhibitor 1 Neighboring gene Suppressor of Hairless Neighboring gene uncharacterized protein Neighboring gene RNA polymerase II elongation factor Neighboring gene sisters on the loose Neighboring gene vasa Neighboring gene vasa intronic gene

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ATP binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables actin filament binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables cadherin binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables cytoskeletal motor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables microfilament motor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables microfilament motor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables myosin light chain binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables plus-end directed microfilament motor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in actin filament organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in actin filament-based movement IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in actin filament-based movement IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in antennal development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in antennal morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in chaeta morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in chitin-based larval cuticle pattern formation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in endocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in filopodium assembly IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in follicle cell microvillus organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in imaginal disc-derived wing hair organization IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in imaginal disc-derived wing vein morphogenesis IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in sensory organ development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in sensory organ development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in sensory perception of sound IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in sensory perception of sound IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    colocalizes_with actin cytoskeleton IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in apical cortex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in basal cortex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cell cortex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in chrorion micropyle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in female germline ring canal outer rim IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in microvillus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in microvillus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of myosin VII complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    part_of myosin complex IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    crinkled
    Names
    CG7595-PA
    CG7595-PB
    CG7595-PC
    CG7595-PD
    ck-PA
    ck-PB
    ck-PC
    ck-PD
    lethal 27 in the black-reduced region
    lethal group D2
    myosin 7a
    myosin 7a heavy chain
    myosin VII
    myosin VIIa
    myosin heavy chain at 35BC
    myosin-7a
    myosin-VII
    mysoin VIIa
    stubby chaetae
    transcription unit D
    NP_001285949.1
    NP_001285950.1
    NP_523571.1
    NP_723895.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      15044963..15057862 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_078847.4NP_523571.1  crinkled, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_523571.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q6NNF6, Q8T0A9, Q9V3Z6
      UniProtKB/TrEMBL
      G7H829
      Related
      FBpp0080283
      Conserved Domains (9) summary
      smart00139
      Location:17011849
      MyTH4; Domain in Myosin and Kinesin Tails
      smart00242
      Location:64733
      MYSc; Myosin. Large ATPases
      smart00295
      Location:18562068
      B41; Band 4.1 homologues
      cd13198
      Location:14611559
      FERM_C1_MyoVII; FERM domain C-lobe, repeat 1, of Myosin VII (MyoVII/Myo7)
      cd13199
      Location:20642159
      FERM_C2_MyoVII; FERM domain C-lobe, repeat 2, of Myosin VII (MyoVII, Myo7)
      cd14473
      Location:13551439
      FERM_B-lobe; FERM domain B-lobe
      cd01381
      Location:77721
      MYSc_Myo7; class VII myosin, motor domain
      pfam00373
      Location:19662068
      FERM_M; FERM central domain
      cl17036
      Location:15601624
      SH3; Src Homology 3 domain superfamily
    2. NM_165099.3NP_723895.1  crinkled, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_723895.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q6NNF6, Q8T0A9, Q9V3Z6
      UniProtKB/TrEMBL
      G7H829
      Related
      FBpp0080282
      Conserved Domains (9) summary
      smart00139
      Location:17011849
      MyTH4; Domain in Myosin and Kinesin Tails
      smart00242
      Location:64733
      MYSc; Myosin. Large ATPases
      smart00295
      Location:18562068
      B41; Band 4.1 homologues
      cd13198
      Location:14611559
      FERM_C1_MyoVII; FERM domain C-lobe, repeat 1, of Myosin VII (MyoVII/Myo7)
      cd13199
      Location:20642159
      FERM_C2_MyoVII; FERM domain C-lobe, repeat 2, of Myosin VII (MyoVII, Myo7)
      cd14473
      Location:13551439
      FERM_B-lobe; FERM domain B-lobe
      cd01381
      Location:77721
      MYSc_Myo7; class VII myosin, motor domain
      pfam00373
      Location:19662068
      FERM_M; FERM central domain
      cl17036
      Location:15601624
      SH3; Src Homology 3 domain superfamily
    3. NM_001299021.1NP_001285950.1  crinkled, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285950.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q6NNF6, Q8T0A9, Q9V3Z6
      UniProtKB/TrEMBL
      G7H829
      Conserved Domains (9) summary
      smart00139
      Location:17011849
      MyTH4; Domain in Myosin and Kinesin Tails
      smart00242
      Location:64733
      MYSc; Myosin. Large ATPases
      smart00295
      Location:18562068
      B41; Band 4.1 homologues
      cd13198
      Location:14611559
      FERM_C1_MyoVII; FERM domain C-lobe, repeat 1, of Myosin VII (MyoVII/Myo7)
      cd13199
      Location:20642159
      FERM_C2_MyoVII; FERM domain C-lobe, repeat 2, of Myosin VII (MyoVII, Myo7)
      cd14473
      Location:13551439
      FERM_B-lobe; FERM domain B-lobe
      cd01381
      Location:77721
      MYSc_Myo7; class VII myosin, motor domain
      pfam00373
      Location:19662068
      FERM_M; FERM central domain
      cl17036
      Location:15601624
      SH3; Src Homology 3 domain superfamily
    4. NM_001299020.1NP_001285949.1  crinkled, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285949.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q6NNF6, Q8T0A9, Q9V3Z6
      UniProtKB/TrEMBL
      G7H829
      Conserved Domains (9) summary
      smart00139
      Location:17011849
      MyTH4; Domain in Myosin and Kinesin Tails
      smart00242
      Location:64733
      MYSc; Myosin. Large ATPases
      smart00295
      Location:18562068
      B41; Band 4.1 homologues
      cd13198
      Location:14611559
      FERM_C1_MyoVII; FERM domain C-lobe, repeat 1, of Myosin VII (MyoVII/Myo7)
      cd13199
      Location:20642159
      FERM_C2_MyoVII; FERM domain C-lobe, repeat 2, of Myosin VII (MyoVII, Myo7)
      cd14473
      Location:13551439
      FERM_B-lobe; FERM domain B-lobe
      cd01381
      Location:77721
      MYSc_Myo7; class VII myosin, motor domain
      pfam00373
      Location:19662068
      FERM_M; FERM central domain
      cl17036
      Location:15601624
      SH3; Src Homology 3 domain superfamily