U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CSS1 Css1p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 854637, updated on 17-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CSS1
    Official Full Name
    Css1p
    Primary source
    SGD:S000001431
    Locus tag
    YIL169C
    See related
    AllianceGenome:SGD:S000001431; FungiDB:YIL169C; VEuPathDB:YIL169C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    HZY1
    Summary
    Predicted to enable protein phosphatase 1 binding activity. Predicted to be involved in membrane fusion; signal transduction; and vesicle-mediated transport. Located in cell periphery and extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CSS1 in Genome Data Viewer
    Location:
    chromosome: IX
    Exon count:
    1
    Sequence:
    Chromosome: IX; NC_001141.2 (23119..26106, complement)

    Chromosome IX - NC_001141.2Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo Neighboring gene Soa1p

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_001141.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Reducing haziness in white wine by overexpression of Saccharomyces cerevisiae genes YOL155c and YDR055w. Brown SL, et al. Appl Microbiol Biotechnol, 2007 Jan. PMID 17024473
    2. Low external pH induces HOG1-dependent changes in the organization of the Saccharomyces cerevisiae cell wall. Kapteyn JC, et al. Mol Microbiol, 2001 Jan. PMID 11136466
    3. Alkaline response genes of Saccharomyces cerevisiae and their relationship to the RIM101 pathway. Lamb TM, et al. J Biol Chem, 2001 Jan 19. PMID 11050096
    4. Analysis of an inactivated Lg-FLO1 gene present in bottom-fermenting yeast. Sato M, et al. J Biosci Bioeng, 2002. PMID 16233220
    5. Disruption and basic functional analysis of six novel ORFs of chromosome XV from Saccharomyces cerevisiae. Lafuente MJ, et al. Yeast, 1999 Jul. PMID 10407273

    See all (17) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    enables protein phosphatase 1 binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    involved_in membrane fusion IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of PTW/PP1 phosphatase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cell periphery HDA PubMed 
    located_in chromatin IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in extracellular region HDA PubMed 
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in fungal-type cell wall IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Css1p
    NP_012097.1
    • Highly variable glycoprotein localized to cell wall via GPI anchor; serine/threonine rich and highly similar to HPF1 haze-protective mannoprotein; necessary and sufficient for haze-positive phenotype in brewing strains which correlates with an expansion in the N-terminal serine-rich region; transcript is induced in both high and low pH environments

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001141.2 Reference assembly

      Range
      23119..26106 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179517.1 → NP_012097.1  TPA: Css1p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_012097.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VVC0, P40442
      Conserved Domains (2) summary
      PRK12355
      Location:627 → 977
      PRK12355; type-F conjugative transfer system mating-pair stabilization protein TraN
      pfam11765
      Location:313 → 596
      Hyphal_reg_CWP; Hyphally regulated cell wall protein N-terminal
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P40442.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools