U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Nscme3l NSE3 homolog, SMC5-SMC6 complex component like [ Mus musculus (house mouse) ]

    Gene ID: 75555, updated on 27-Dec-2024

    Summary

    Official Symbol
    Nscme3lprovided by MGI
    Official Full Name
    NSE3 homolog, SMC5-SMC6 complex component likeprovided by MGI
    Primary source
    MGI:MGI:1922805
    See related
    Ensembl:ENSMUSG00000100937 AllianceGenome:MGI:1922805
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    mage-g2; 1700020D05Rik
    Summary
    Predicted to enable protein dimerization activity. Predicted to be involved in several processes, including cellular response to UV; cellular response to hydroxyurea; and regulation of primary metabolic process. Predicted to be part of Smc5-Smc6 complex. Predicted to be active in nucleus. Orthologous to human NSMCE3 (NSE3 homolog, SMC5-SMC6 complex component). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Nscme3l in Genome Data Viewer
    Location:
    19 A; 19 4.34 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (5552795..5553815, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (5502767..5503787, complement)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene CapStarr-seq enhancer MGSCv37_chr19:5488369-5488552 Neighboring gene STARR-positive B cell enhancer ABC_E779 Neighboring gene STARR-positive B cell enhancer ABC_E8730 Neighboring gene MUS81 structure-specific endonuclease subunit Neighboring gene CapStarr-seq enhancer MGSCv37_chr19:5491370-5491523 Neighboring gene cofilin 1, non-muscle Neighboring gene sorting nexin 32 Neighboring gene STARR-positive B cell enhancer ABC_E1208 Neighboring gene predicted gene, 31166 Neighboring gene ovo like zinc finger 1 Neighboring gene adaptor-related protein complex 5, beta 1 subunit

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    enables protein dimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in DNA repair ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to UV ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to hydroxyurea ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to radiation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of protein ubiquitination ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    part_of Smc5-Smc6 complex ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_023781.5NP_076270.3  mage-g2 protein

      See identical proteins and their annotated locations for NP_076270.3

      Status: VALIDATED

      Source sequence(s)
      AK006150, BC061091
      Consensus CDS
      CCDS79675.1
      UniProtKB/TrEMBL
      Q99PB1, Q9DA56
      Related
      ENSMUSP00000140922.2, ENSMUST00000189704.2
      Conserved Domains (1) summary
      pfam01454
      Location:82251
      MAGE; MAGE family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      5552795..5553815 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)