U.S. flag

An official website of the United States government

Some NLM-NCBI services and products are experiencing heavy traffic, which may affect performance and availability. We apologize for the inconvenience and appreciate your patience. For assistance, please contact our Help Desk at info@ncbi.nlm.nih.gov.

Links from GEO Profiles

    • Showing Current items.

    immunoglobulin [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841434, updated on 18-Sep-2024

    Summary

    Official Full Name
    immunoglobulin
    Primary source
    TAIR:AT1G50120
    Locus tag
    AT1G50120
    See related
    Araport:AT1G50120
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2J10.3; F2J10_3
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    chromosome: 1
    Exon count:
    12
    Sequence:
    Chromosome: 1; NC_003070.9 (18561728..18566269)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene tRNA-Leu Neighboring gene D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein Neighboring gene miscRNA Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein

    General gene information

    NM_001333420.1
    NM_103898.5

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    colocalizes_with Golgi cisterna PubMed 
    located_in nucleus  
    colocalizes_with pollen tube PubMed 
    located_in trans-Golgi network PubMed 

    General protein information

    Preferred Names
    immunoglobulin
    NP_175432.2
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rgp1 (InterPro:IPR014848), Immunoglobulin E-set (InterPro:IPR014756); Has 144 Blast hits to 140 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 86; Fungi - 10; Plants - 39; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      18561728..18566269
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103898.5NP_175432.2  immunoglobulin [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175432.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WEH6, Q8RWU2
      Conserved Domains (1) summary
      pfam08737
      Location:355475
      Rgp1; Rgp1
    2. NM_001333420.1NP_001322050.1  immunoglobulin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WEH6, A0A1P8ASX9
    External link. Please review our privacy policy.