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    yebY DUF2511 domain-containing protein YebY [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947014, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yebY
    Official Full Name
    DUF2511 domain-containing protein YebY
    Primary source
    ECOCYC:G7012
    Locus tag
    b1839
    See related
    ASAP:ABE-0006118
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1840
    Summary
    Upregulated by GSNO in defined medium (aerobic). [More information is available at EcoGene: EG14027].
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    Genomic context

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    Sequence:
    NC_000913.3 (1923365..1923706, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene phosphoprotein phosphatase 1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene CopD family protein Neighboring gene copper-binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The copper-linked Escherichia coli AZY operon: Structure, metal binding, and a possible physiological role in copper delivery. Hadley RC, et al. J Biol Chem, 2022 Jan. PMID 34822841, Free PMC Article
    2. Transcriptional responses of Escherichia coli to S-nitrosoglutathione under defined chemostat conditions reveal major changes in methionine biosynthesis. Flatley J, et al. J Biol Chem, 2005 Mar 18. PMID 15647275
    3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in copper ion homeostasis IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in outer membrane-bounded periplasmic space IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DUF2511 domain-containing protein YebY

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1923365..1923706 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416353.1 DUF2511 domain-containing protein YebY [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416353.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A094WEY7
      Conserved Domains (1) summary
      pfam10709
      Location:26 → 113
      DUF2511; Protein of unknown function (DUF2511)
    Nucleotide Protein
    Heading Accession and Version

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