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    sgcX putative endoglucanase with Zn-dependent exopeptidase domain [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948840, updated on 3-Dec-2024

    Summary

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    Official Symbol
    sgcX
    Official Full Name
    putative endoglucanase with Zn-dependent exopeptidase domain
    Primary source
    ECOCYC:EG12557
    Locus tag
    b4305
    See related
    ASAP:ABE-0014112
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4295; yjhO
    Summary
    ypdE, frvX and sgcX are paralogs. [More information is available at EcoGene: EG12557].
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    Genomic context

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    Sequence:
    NC_000913.3 (4530530..4531651, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative nucleoside triphosphatase Neighboring gene putative PTS enzyme IIC component SgcC Neighboring gene putative PTS enzyme IIB component SgcB Neighboring gene pseudo Neighboring gene putative methyltransferase YjhP

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. MEROPS: the peptidase database. Rawlings ND, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381862, Free PMC Article
    2. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables aminopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metalloaminopeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables metallopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative endoglucanase with Zn-dependent exopeptidase domain

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4530530..4531651 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418725.4 putative endoglucanase with Zn-dependent exopeptidase domain [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418725.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A192CHF4, A0A1X3JMT5
      Conserved Domains (1) summary
      cd05656
      Location:7 → 351
      M42_Frv; M42 Peptidase, endoglucanases
    Nucleotide Protein
    Heading Accession and Version

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