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    rarD putative transporter RarD [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948330, updated on 3-Dec-2024

    Summary

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    Official Symbol
    rarD
    Official Full Name
    putative transporter RarD
    Primary source
    ECOCYC:EG11466
    Locus tag
    b3819
    See related
    ASAP:ABE-0012472
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3813; yigH
    Summary
    RarD is an inner membrane protein with nine predicted transmembrane domains. [More information is available at EcoCyc: EG11466].
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    Genomic context

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    Sequence:
    NC_000913.3 (4003288..4004178, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF2628 domain-containing protein YigF Neighboring gene inner membrane protein Neighboring gene putative thioesterase YigI Neighboring gene outer membrane phospholipase A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global gene expression profiling in Escherichia coli K12: effects of oxygen availability and ArcA. Salmon KA, et al. J Biol Chem, 2005 Apr 15. PMID 15699038
    2. Analysis of the Escherichia coli genome: DNA sequence of the region from 84.5 to 86.5 minutes. Daniels DL, et al. Science, 1992 Aug 7. PMID 1379743
    3. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
    4. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative transporter RarD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4003288..4004178 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_026262.1 putative transporter RarD [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for YP_026262.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A7A6VL03, A0A7A6ZYH2
      Conserved Domains (1) summary
      PRK15430
      Location:1 → 296
      PRK15430; EamA family transporter RarD
    Nucleotide Protein
    Heading Accession and Version

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