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    ygiF inorganic triphosphatase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947554, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ygiF
    Official Full Name
    inorganic triphosphatase
    Primary source
    ECOCYC:EG11603
    Locus tag
    b3054
    See related
    ASAP:ABE-0010020
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3044
    Summary
    ygiF is cotranscribed with glnE . [More information is available at EcoCyc: EG11603].
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    Genomic context

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    Sequence:
    NC_000913.3 (3199664..3200965, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase Neighboring gene fused glutamine synthetase deadenylase/glutamine synthetase adenylyltransferase Neighboring gene putative signal transduction protein (SH3 domain) Neighboring gene fused CCA tRNA nucleotidyltransferase/phosphohydrolase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes. Martinez J, et al. J Biol Chem, 2015 Sep 18. PMID 26221030, Free PMC Article
    2. The genes of the glutamine synthetase adenylylation cascade are not regulated by nitrogen in Escherichia coli. van Heeswijk WC, et al. Mol Microbiol, 1993 Aug. PMID 8412694
    3. High inorganic triphosphatase activities in bacteria and mammalian cells: identification of the enzymes involved. Kohn G, et al. PLoS One, 2012. PMID 22984449, Free PMC Article
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables inorganic triphosphate phosphatase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables inorganic triphosphate phosphatase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables inorganic triphosphate phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables metal ion binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    inorganic triphosphatase
    NP_417526.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3199664..3200965 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417526.1 inorganic triphosphatase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417526.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7EC17
      Conserved Domains (1) summary
      COG3025
      Location:1 → 432
      PPPi; Inorganic triphosphatase YgiF, contains CYTH and CHAD domains [Inorganic ion transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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