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    insD1 IS2 element protein [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945203, updated on 17-Dec-2024

    Summary

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    Official Symbol
    insD1
    Official Full Name
    IS2 element protein
    Primary source
    ECOCYC:G6213
    Locus tag
    b0361
    See related
    ASAP:ABE-0001239
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0358; yi22-1
    Summary
    IS2E is a partial IS2 sequence and has a insD pseudogene with residues 72-301. [More information is available at EcoGene: EG60013]. No specific function has been identified for this protein that is coded for by the IS2 insertion sequence element. [More information is available at EcoCyc: G6213].
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    Genomic context

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    Sequence:
    NC_000913.3 (381674..382579)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional repressor FrmR Neighboring gene outer membrane protein YaiO Neighboring gene pseudo Neighboring gene IS2 element protein InsA Neighboring gene putative glucosyltransferase Neighboring gene protein YkiC Neighboring gene putative deacetylase YaiS

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Inhibition of IS2 transposition by factor for inversion stimulation. Lei GS, et al. FEMS Microbiol Lett, 2007 Oct. PMID 17666068
    2. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    3. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    4. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA integration IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in DNA recombination IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in transposition IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    IS2 element protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      381674..382579
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414895.1 IS2 element protein [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414895.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A161IS57, A0A2H4TYD0
      Conserved Domains (1) summary
      PRK09409
      Location:1 → 301
      PRK09409; IS2 transposase TnpB; Reviewed
    Nucleotide Protein
    Heading Accession and Version

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