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    yebC putative transcriptional regulator YebC [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946379, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yebC
    Official Full Name
    putative transcriptional regulator YebC
    Primary source
    ECOCYC:EG11137
    Locus tag
    b1864
    See related
    ASAP:ABE-0006219
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1865
    Summary
    YeeN and YebC are paralogs. [More information is available at EcoGene: EG11137]. A yebC null mutant grows normally at 37 C . [More information is available at EcoCyc: EG11137].
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    Genomic context

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    Sequence:
    NC_000913.3 (1947411..1948151, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative papain-like amidase YebB Neighboring gene crossover junction endodeoxyribonuclease RuvC Neighboring gene dihydroneopterin triphosphate diphosphatase Neighboring gene aspartate--tRNA ligase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Resolution of Holliday junctions in Escherichia coli: identification of the ruvC gene product as a 19-kilodalton protein. Sharples GJ, et al. J Bacteriol, 1991 Dec. PMID 1657895, Free PMC Article
    2. Proteomics of Mycoplasma genitalium: identification and characterization of unannotated and atypical proteins in a small model genome. Balasubramanian S, et al. Nucleic Acids Res, 2000 Aug 15. PMID 10931922, Free PMC Article
    3. Molecular analysis of the Escherichia coli ruvC gene, which encodes a Holliday junction-specific endonuclease. Takahagi M, et al. J Bacteriol, 1991 Sep. PMID 1885548, Free PMC Article
    4. A new essential gene of the 'minimal genome' affecting cell division. Dassain M, et al. Biochimie, 1999 Aug-Sep. PMID 10572302
    5. A genome-based approach for the identification of essential bacterial genes. Arigoni F, et al. Nat Biotechnol, 1998 Sep. PMID 9743119

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to ionizing radiation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative transcriptional regulator YebC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1947411..1948151 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416378.1 putative transcriptional regulator YebC [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416378.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S0FSP3
      Conserved Domains (1) summary
      PRK00110
      Location:1 → 246
      PRK00110; YebC/PmpR family DNA-binding transcriptional regulator
    Nucleotide Protein
    Heading Accession and Version

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