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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001145464.2 → NP_001138936.1 nuclease EXOG, mitochondrial isoform 2 precursor
See identical proteins and their annotated locations for NP_001138936.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 5' coding region. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AA993872, AB020523, AK290107, AK301067, AP006241
- Consensus CDS
-
CCDS46795.1
- UniProtKB/TrEMBL
-
B3KN09
- Related
- ENSP00000404305.2, ENST00000422077.6
- Conserved Domains (1) summary
-
- smart00477
Location:48 → 236
- NUC; DNA/RNA non-specific endonuclease
-
NM_005107.4 → NP_005098.2 nuclease EXOG, mitochondrial isoform 1 precursor
See identical proteins and their annotated locations for NP_005098.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AA993872, AB020523, AK290107, AK301067, AP006241
- Consensus CDS
-
CCDS2680.1
- UniProtKB/Swiss-Prot
- A8K242, B4DVG2, Q3SXM9, Q9Y2C4, Q9Y2C8
- UniProtKB/TrEMBL
-
B3KN09
- Related
- ENSP00000287675.5, ENST00000287675.10
- Conserved Domains (1) summary
-
- smart00477
Location:77 → 286
- NUC; DNA/RNA non-specific endonuclease
RNA
-
NR_134938.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (9) has multiple differences, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK290107, AK308814, AP006241, W58006
-
NR_153322.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (10) has multiple differences, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AP006241
-
NR_153323.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (11) has multiple differences, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AP006241
-
NR_153324.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (12) has multiple differences, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AP006241
-
NR_153325.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) has multiple differences, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AP006241
-
NR_153326.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) has multiple differences, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AP006241
-
NR_153327.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) has multiple differences, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AP006241
-
NR_153328.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) has multiple differences, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AP006241
-
NR_153329.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) has multiple differences, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AP006241
-
NR_153330.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) has multiple differences, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AP006241
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
38496340..38526303
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047449374.1 → XP_047305330.1 nuclease EXOG, mitochondrial isoform X2
-
XM_047449372.1 → XP_047305328.1 nuclease EXOG, mitochondrial isoform X1
-
XM_047449375.1 → XP_047305331.1 nuclease EXOG, mitochondrial isoform X2
-
XM_047449373.1 → XP_047305329.1 nuclease EXOG, mitochondrial isoform X1
-
XM_047449376.1 → XP_047305332.1 nuclease EXOG, mitochondrial isoform X2
-
XM_047449377.1 → XP_047305333.1 nuclease EXOG, mitochondrial isoform X2
-
XM_047449378.1 → XP_047305334.1 nuclease EXOG, mitochondrial isoform X2
-
XM_047449379.1 → XP_047305335.1 nuclease EXOG, mitochondrial isoform X2
-
XM_047449380.1 → XP_047305336.1 nuclease EXOG, mitochondrial isoform X2
RNA
-
XR_940530.4 RNA Sequence
-
XR_940529.4 RNA Sequence
-
XR_940528.2 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
38489424..38532347
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054348656.1 → XP_054204631.1 nuclease EXOG, mitochondrial isoform X2
-
XM_054348655.1 → XP_054204630.1 nuclease EXOG, mitochondrial isoform X1
-
XM_054348657.1 → XP_054204632.1 nuclease EXOG, mitochondrial isoform X2
-
XM_054348658.1 → XP_054204633.1 nuclease EXOG, mitochondrial isoform X2
-
XM_054348659.1 → XP_054204634.1 nuclease EXOG, mitochondrial isoform X2
-
XM_054348662.1 → XP_054204637.1 nuclease EXOG, mitochondrial isoform X3
- UniProtKB/TrEMBL
-
H7C0W6
-
XM_054348654.1 → XP_054204629.1 nuclease EXOG, mitochondrial isoform X1
-
XM_054348660.1 → XP_054204635.1 nuclease EXOG, mitochondrial isoform X2
-
XM_054348661.1 → XP_054204636.1 nuclease EXOG, mitochondrial isoform X2
RNA
-
XR_008486876.1 RNA Sequence
-
XR_008486875.1 RNA Sequence
-
XR_008486874.1 RNA Sequence
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001318954.1: Suppressed sequence
- Description
- NM_001318954.1: This RefSeq was removed because currently there is support for the transcript but not for the protein.
-
NM_001318955.1: Suppressed sequence
- Description
- NM_001318955.1: This RefSeq was removed because currently there is support for the transcript but not for the protein.
-
NM_001318956.1: Suppressed sequence
- Description
- NM_001318956.1: This RefSeq was removed because currently there is support for the transcript but not for the protein.
-
NM_001318957.1: Suppressed sequence
- Description
- NM_001318957.1: This RefSeq was removed because currently there is support for the transcript but not for the protein.
-
NM_001318958.1: Suppressed sequence
- Description
- NM_001318958.1: This RefSeq was removed because currently there is support for the transcript but not for the protein.
-
NM_001318959.1: Suppressed sequence
- Description
- NM_001318959.1: This RefSeq was removed because currently there is support for the transcript but not for the protein.