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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001351277.2 → NP_001338206.1 la-related protein 4B isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. The encoded isoform (2) is longer than isoform 1.
- Source sequence(s)
-
AL157709, AU132926, BC152443, BM684990, HY013410
- UniProtKB/TrEMBL
-
A0A8I5KWN8
- Conserved Domains (2) summary
-
- cd08036
Location:157 → 231
- LARP_5; La RNA-binding domain of La-related protein 5
- cd12706
Location:236 → 312
- RRM_LARP5; RNA recognition motif in vertebrate La-related protein 5 (LARP5 or LARP4B)
-
NM_015155.3 → NP_055970.1 la-related protein 4B isoform 1
See identical proteins and their annotated locations for NP_055970.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the shorter isoform (1).
- Source sequence(s)
-
AL157709, AL359878
- Consensus CDS
-
CCDS31131.1
- UniProtKB/Swiss-Prot
- A7MD20, Q5T3R3, Q5T3R4, Q5T3R5, Q68CY4, Q92615
- UniProtKB/TrEMBL
-
A0A8I5KWN8
- Related
- ENSP00000326128.3, ENST00000316157.8
- Conserved Domains (2) summary
-
- cd08036
Location:157 → 231
- LARP_5; La RNA-binding domain of La-related protein 5
- cd12706
Location:236 → 312
- RRM_LARP5; RNA recognition motif in vertebrate La-related protein 5 (LARP5 or LARP4B)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000010.11 Reference GRCh38.p14 Primary Assembly
- Range
-
806914..988341 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047424897.1 → XP_047280853.1 la-related protein 4B isoform X5
- UniProtKB/Swiss-Prot
- A7MD20, Q5T3R3, Q5T3R4, Q5T3R5, Q68CY4, Q92615
- UniProtKB/TrEMBL
-
A0A8I5KWN8
- Related
- ENSP00000509705.1, ENST00000688365.1
-
XM_047424894.1 → XP_047280850.1 la-related protein 4B isoform X4
- UniProtKB/TrEMBL
-
A0A8I5KWN8
-
XM_047424893.1 → XP_047280849.1 la-related protein 4B isoform X4
- UniProtKB/TrEMBL
-
A0A8I5KWN8
-
XM_047424896.1 → XP_047280852.1 la-related protein 4B isoform X5
- UniProtKB/Swiss-Prot
- A7MD20, Q5T3R3, Q5T3R4, Q5T3R5, Q68CY4, Q92615
- UniProtKB/TrEMBL
-
A0A8I5KWN8
-
XM_047424892.1 → XP_047280848.1 la-related protein 4B isoform X4
- UniProtKB/TrEMBL
-
A0A8I5KWN8
-
XM_047424895.1 → XP_047280851.1 la-related protein 4B isoform X4
- UniProtKB/TrEMBL
-
A0A8I5KWN8
-
XM_017015990.2 → XP_016871479.1 la-related protein 4B isoform X4
- UniProtKB/TrEMBL
-
A0A8I5KWN8
- Conserved Domains (2) summary
-
- cd08036
Location:157 → 231
- LARP_5; La RNA-binding domain of La-related protein 5
- cd12706
Location:236 → 312
- RRM_LARP5; RNA recognition motif in vertebrate La-related protein 5 (LARP5 or LARP4B)
-
XM_017015988.2 → XP_016871477.1 la-related protein 4B isoform X2
-
XM_017015987.2 → XP_016871476.1 la-related protein 4B isoform X1
-
XM_017015992.2 → XP_016871481.1 la-related protein 4B isoform X9
- UniProtKB/TrEMBL
-
A0A8I5KWN8
- Conserved Domains (2) summary
-
- cd12706
Location:79 → 155
- RRM_LARP5; RNA recognition motif in vertebrate La-related protein 5 (LARP5 or LARP4B)
- cl02755
Location:26 → 74
- LAM; LA motif RNA-binding domain
-
XM_047424902.1 → XP_047280858.1 la-related protein 4B isoform X10
- UniProtKB/TrEMBL
-
A0A8I5KWN8
-
XM_047424901.1 → XP_047280857.1 la-related protein 4B isoform X8
- UniProtKB/TrEMBL
-
A0A8I5KWN8
-
XM_047424898.1 → XP_047280854.1 la-related protein 4B isoform X6
- UniProtKB/TrEMBL
-
A0A8I5KWN8
-
XM_047424899.1 → XP_047280855.1 la-related protein 4B isoform X6
- UniProtKB/TrEMBL
-
A0A8I5KWN8
-
XM_017015989.2 → XP_016871478.1 la-related protein 4B isoform X3
-
XM_047424900.1 → XP_047280856.1 la-related protein 4B isoform X7
-
XM_017015995.2 → XP_016871484.1 la-related protein 4B isoform X11
RNA
-
XR_001747069.2 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060934.1 Alternate T2T-CHM13v2.0
- Range
-
804686..932709 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054365328.1 → XP_054221303.1 la-related protein 4B isoform X5
- UniProtKB/TrEMBL
-
A0A8I5KWN8
-
XM_054365325.1 → XP_054221300.1 la-related protein 4B isoform X4
- UniProtKB/TrEMBL
-
A0A8I5KWN8
-
XM_054365327.1 → XP_054221302.1 la-related protein 4B isoform X5
- UniProtKB/TrEMBL
-
A0A8I5KWN8
-
XM_054365324.1 → XP_054221299.1 la-related protein 4B isoform X4
- UniProtKB/TrEMBL
-
A0A8I5KWN8
-
XM_054365326.1 → XP_054221301.1 la-related protein 4B isoform X4
- UniProtKB/TrEMBL
-
A0A8I5KWN8
-
XM_054365323.1 → XP_054221298.1 la-related protein 4B isoform X4
- UniProtKB/TrEMBL
-
A0A8I5KWN8
-
XM_054365320.1 → XP_054221295.1 la-related protein 4B isoform X1
-
XM_054365321.1 → XP_054221296.1 la-related protein 4B isoform X2
-
XM_054365333.1 → XP_054221308.1 la-related protein 4B isoform X9
- UniProtKB/TrEMBL
-
A0A8I5KWN8
-
XM_054365334.1 → XP_054221309.1 la-related protein 4B isoform X10
- UniProtKB/TrEMBL
-
A0A8I5KWN8
-
XM_054365332.1 → XP_054221307.1 la-related protein 4B isoform X8
- UniProtKB/TrEMBL
-
A0A8I5KWN8
-
XM_054365329.1 → XP_054221304.1 la-related protein 4B isoform X6
- UniProtKB/TrEMBL
-
A0A8I5KWN8
-
XM_054365330.1 → XP_054221305.1 la-related protein 4B isoform X6
- UniProtKB/TrEMBL
-
A0A8I5KWN8
-
XM_054365322.1 → XP_054221297.1 la-related protein 4B isoform X3
-
XM_054365331.1 → XP_054221306.1 la-related protein 4B isoform X7
-
XM_054365335.1 → XP_054221310.1 la-related protein 4B isoform X11
RNA
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XR_008488184.1 RNA Sequence