U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    betA choline dehydrogenase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945716, updated on 3-Dec-2024

    Summary

    Official Symbol
    betA
    Official Full Name
    choline dehydrogenase
    Primary source
    ECOCYC:EG10109
    Locus tag
    b0311
    See related
    ASAP:ABE-0001070
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0309
    Summary
    The bet genes are induced by choline, oxygen, and osmotic stress. [More information is available at EcoGene: EG10109]. The subunit structure is not yet known. [More information is available at EcoCyc: EG10109].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Sequence:
    NC_000913.3 (325577..327247, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain Neighboring gene DUF162 domain-containing lactate utilization protein YkgG Neighboring gene uncharacterized protein YkgH Neighboring gene betaine aldehyde dehydrogenase Neighboring gene DNA-binding transcriptional repressor BetI

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables betaine-aldehyde dehydrogenase (NAD+) activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables choline dehydrogenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables choline dehydrogenase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables choline dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    choline dehydrogenase
    NP_414845.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      325577..327247 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414845.1 choline dehydrogenase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414845.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7R7Q4
      Conserved Domains (1) summary
      PRK02106
      Location:1555
      PRK02106; choline dehydrogenase; Validated