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    yeeN putative transcriptional regulator YeeN [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946493, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yeeN
    Official Full Name
    putative transcriptional regulator YeeN
    Primary source
    ECOCYC:G7068
    Locus tag
    b1983
    See related
    ASAP:ABE-0006582
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1978
    Summary
    YeeN deletion confers cold-sensitive growth, Dassain(1999). [More information is available at EcoGene: EG13382]. In a study of the Escherichia coli complexome, YeeN was found in a cytoplasmic complex together with YbbN and YeeZ . [More information is available at EcoCyc: G7068].
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    Genomic context

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    Sequence:
    NC_000913.3 (2056858..2057574)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene shikimate:H(+) symporter Neighboring gene AMP nucleosidase Neighboring gene tRNA-Asn Neighboring gene FMN/FAD exporter

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new essential gene of the 'minimal genome' affecting cell division. Dassain M, et al. Biochimie, 1999 Aug-Sep. PMID 10572302
    2. The diversity of lysine-acetylated proteins in Escherichia coli. Yu BJ, et al. J Microbiol Biotechnol, 2008 Sep. PMID 18852508
    3. A complexomic study of Escherichia coli using two-dimensional blue native/SDS polyacrylamide gel electrophoresis. Lasserre JP, et al. Electrophoresis, 2006 Aug. PMID 16858726
    4. Interaction network containing conserved and essential protein complexes in Escherichia coli. Butland G, et al. Nature, 2005 Feb 3. PMID 15690043
    5. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative transcriptional regulator YeeN

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2056858..2057574
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416490.1 putative transcriptional regulator YeeN [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416490.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A377BBA6
      Conserved Domains (1) summary
      PRK12378
      Location:1 → 236
      PRK12378; YebC/PmpR family DNA-binding transcriptional regulator
    Nucleotide Protein
    Heading Accession and Version

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