U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Sstr4 somatostatin receptor 4 [ Mus musculus (house mouse) ]

    Gene ID: 20608, updated on 9-Dec-2024

    Summary

    Official Symbol
    Sstr4provided by MGI
    Official Full Name
    somatostatin receptor 4provided by MGI
    Primary source
    MGI:MGI:105372
    See related
    Ensembl:ENSMUSG00000037014 AllianceGenome:MGI:105372
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    sst4; Smstr4
    Summary
    Predicted to enable neuropeptide binding activity and somatostatin receptor activity. Predicted to be involved in several processes, including neuropeptide signaling pathway; positive regulation of arachidonate secretion; and regulation of signal transduction. Predicted to be active in neuron projection and plasma membrane. Is expressed in several structures, including genitourinary system; gut; nervous system; respiratory system; and sensory organ. Orthologous to human SSTR4 (somatostatin receptor 4). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Sstr4 in Genome Data Viewer
    Location:
    2 G3; 2 73.44 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (148237297..148238684)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (148395377..148396764)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 36597 Neighboring gene predicted gene, 39957 Neighboring gene STARR-seq mESC enhancer starr_05968 Neighboring gene STARR-positive B cell enhancer ABC_E9205 Neighboring gene STARR-seq mESC enhancer starr_05969 Neighboring gene STARR-seq mESC enhancer starr_05970 Neighboring gene STARR-positive B cell enhancer ABC_E5997 Neighboring gene thrombomodulin Neighboring gene STARR-positive B cell enhancer ABC_E2051 Neighboring gene CD93 antigen

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (5)  1 citation

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables neuropeptide binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables somatostatin receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables somatostatin receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables somatostatin receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in neuron projection IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    somatostatin receptor type 4
    Names
    SS-4-R
    SS4-R
    SS4R

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009219.3NP_033245.2  somatostatin receptor type 4

      See identical proteins and their annotated locations for NP_033245.2

      Status: PROVISIONAL

      Source sequence(s)
      AK051189, CB522494
      Consensus CDS
      CCDS38260.1
      UniProtKB/Swiss-Prot
      P49660, Q8BQ97
      UniProtKB/TrEMBL
      A0A0R4J1D6
      Related
      ENSMUSP00000105588.3, ENSMUST00000109962.4
      Conserved Domains (1) summary
      cd15973
      Location:45319
      7tmA_SSTR4; somatostatin receptor type 4, member of the class A family of seven-transmembrane G protein-coupled receptors

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      148237297..148238684
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)