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    yajI putative lipoprotein YajI [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947233, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yajI
    Official Full Name
    putative lipoprotein YajI
    Primary source
    ECOCYC:EG12874
    Locus tag
    b0412
    See related
    ASAP:ABE-0001433
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0406
    Summary
    First 19 aa are predicted to be a type II signal peptide. [More information is available at EcoGene: EG12874].
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    Genomic context

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    Sequence:
    NC_000913.3 (432312..432851, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene HNH nuclease family protein YajD Neighboring gene nucleoside-specific channel-forming protein Tsx Neighboring gene NrdR transcriptional repressor Neighboring gene fused diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insertional disruption of the nusB (ssyB) gene leads to cold-sensitive growth of Escherichia coli and suppression of the secY24 mutation. Taura T, et al. Mol Gen Genet, 1992 Sep. PMID 1406588
    2. Genome-wide analyses revealing a signaling network of the RcsC-YojN-RcsB phosphorelay system in Escherichia coli. Hagiwara D, et al. J Bacteriol, 2003 Oct. PMID 13129944, Free PMC Article
    3. Detection of new genes in a bacterial genome using Markov models for three gene classes. Borodovsky M, et al. Nucleic Acids Res, 1995 Sep 11. PMID 7567469, Free PMC Article
    4. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
    5. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative lipoprotein YajI

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      432312..432851 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414946.4 putative lipoprotein YajI [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414946.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376FRZ6
      Conserved Domains (1) summary
      PRK11530
      Location:1 → 179
      PRK11530; hypothetical protein; Provisional
    Nucleotide Protein
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