Golga7b golgin A7B [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Golga7bprovided by MGI
Official Full Name: golgin A7Bprovided by MGI
Primary source: MGI:MGI:1918396
See related: Ensembl:ENSMUSG00000042532 AllianceGenome:MGI:1918396
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: 4933417O08Rik
Summary: Enables enzyme binding activity. Predicted to be involved in protein targeting to membrane. Predicted to be located in Golgi membrane and plasma membrane. Predicted to be part of palmitoyltransferase complex. Is expressed in cerebral cortex intermediate zone; cerebral cortex subventricular zone; cerebral cortex ventricular layer; and cortical plate. Orthologous to human GOLGA7B (golgin A7 family member B). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Biased expression in cortex adult (RPKM 28.5), frontal lobe adult (RPKM 24.8) and 5 other tissues See more
Orthologs: human all
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Genomic context

Location:: 19 C3; 19 36.01 cM

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	19	NC_000085.7 (42236017..42258787)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	19	NC_000085.6 (42247578..42270348)

Chromosome 19 - NC_000085.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (2)

General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables enzyme binding	IPI Inferred from Physical Interaction more info	PubMed
enables enzyme binding	ISO Inferred from Sequence Orthology more info
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
involved_in protein targeting to membrane	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in Golgi membrane	IEA Inferred from Electronic Annotation more info
part_of palmitoyltransferase complex	IBA Inferred from Biological aspect of Ancestor more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: golgin subfamily A member 7B

Names: golgi autoantigen, golgin subfamily a, 7B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001141983.1 → NP_001135455.1 golgin subfamily A member 7B

See identical proteins and their annotated locations for NP_001135455.1

Status: VALIDATED

Description

Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein.

Source sequence(s)

AI839934, AK016850, BC049116

Consensus CDS

CCDS29827.1

UniProtKB/Swiss-Prot

A8Y5D0, Q3UTK8, Q9D428

Related

ENSMUSP00000112575.2, ENSMUST00000122375.8

Conserved Domains (1) summary

pfam10256
Location:21 → 133

Erf4; Golgin subfamily A member 7/ERF4 family
NM_027694.2 → NP_081970.1 golgin subfamily A member 7B

See identical proteins and their annotated locations for NP_081970.1

Status: VALIDATED

Description

Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same protein.

Source sequence(s)

AI839934, AK139354, BC049116

Consensus CDS

CCDS29827.1

UniProtKB/Swiss-Prot

A8Y5D0, Q3UTK8, Q9D428

Related

ENSMUSP00000084362.6, ENSMUST00000087123.6

Conserved Domains (1) summary

pfam10256
Location:21 → 133

Erf4; Golgin subfamily A member 7/ERF4 family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

NC_000085.7 Reference GRCm39 C57BL/6J

Range

42236017..42258787

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_030251077.1 → XP_030106937.1 golgin subfamily A member 7B isoform X1

UniProtKB/Swiss-Prot

A8Y5D0, Q3UTK8, Q9D428

Conserved Domains (1) summary

pfam10256
Location:21 → 133

Erf4; Golgin subfamily A member 7/ERF4 family
XM_030251076.2 → XP_030106936.1 golgin subfamily A member 7B isoform X1

UniProtKB/Swiss-Prot

A8Y5D0, Q3UTK8, Q9D428

Conserved Domains (1) summary

pfam10256
Location:21 → 133

Erf4; Golgin subfamily A member 7/ERF4 family