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    Gm12843 predicted gene 12843 [ Mus musculus (house mouse) ]

    Gene ID: 102637763, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm12843provided by MGI
    Official Full Name
    predicted gene 12843provided by MGI
    Primary source
    MGI:MGI:3651051
    See related
    AllianceGenome:MGI:3651051
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See Gm12843 in Genome Data Viewer
    Location:
    4 53.44 cM; 4 D1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (117146405..117162586)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (117289360..117305389)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 23287 Neighboring gene armadillo-like helical domain containing 1 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:116923419-116923602 Neighboring gene STARR-positive B cell enhancer ABC_E7982 Neighboring gene transmembrane protein 53 Neighboring gene STARR-seq mESC enhancer starr_11163 Neighboring gene ring finger protein 220 Neighboring gene predicted gene, 40231 Neighboring gene STARR-seq mESC enhancer starr_11170 Neighboring gene STARR-seq mESC enhancer starr_11172 Neighboring gene STARR-seq mESC enhancer starr_11174 Neighboring gene STARR-seq mESC enhancer starr_11177 Neighboring gene STARR-seq mESC enhancer starr_11178 Neighboring gene STARR-seq mESC enhancer starr_11179 Neighboring gene STARR-seq mESC enhancer starr_11180 Neighboring gene predicted gene 12828

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
    2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      117146405..117162586
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_004942165.1 RNA Sequence

    2. XR_004942169.1 RNA Sequence

    3. XR_004942166.1 RNA Sequence

    4. XR_004942172.1 RNA Sequence

    5. XR_004942168.1 RNA Sequence

    6. XR_004942167.1 RNA Sequence

    7. XR_003955258.2 RNA Sequence

    8. XR_003955264.2 RNA Sequence

    9. XR_004942170.1 RNA Sequence

    10. XR_004942171.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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