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    allD ureidoglycolate dehydrogenase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948342, updated on 3-Dec-2024

    Summary

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    Official Symbol
    allD
    Official Full Name
    ureidoglycolate dehydrogenase
    Primary source
    ECOCYC:G6286
    Locus tag
    b0517
    See related
    ASAP:ABE-0001780
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0510; glxB8; ylbC
    Summary
    Ureidoglycolate dehydrogenase catalyzes the oxidation of ureidoglycolate to oxalurate, a final step in the assimilation of allantoin . [More information is available at EcoCyc: G6286].
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    Genomic context

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    Sequence:
    NC_000913.3 (545314..546363, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene (S)-ureidoglycine aminohydrolase Neighboring gene allantoate amidohydrolase Neighboring gene putative oxamate carbamoyltransferase FdrA Neighboring gene DUF1116 domain-containing protein YlbE

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structural and functional insights into (S)-ureidoglycolate dehydrogenase, a metabolic branch point enzyme in nitrogen utilization. Kim MI, et al. PLoS One, 2012. PMID 23284870, Free PMC Article
    2. Regulation of the Escherichia coli allantoin regulon: coordinated function of the repressor AllR and the activator AllS. Rintoul MR, et al. J Mol Biol, 2002 Dec 6. PMID 12460564
    3. Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli. Cusa E, et al. J Bacteriol, 1999 Dec. PMID 10601204, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ureidoglycolate dehydrogenase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within allantoin assimilation pathway IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in allantoin catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in purine nucleobase metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ureidoglycolate dehydrogenase
    NP_415050.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      545314..546363 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415050.1 ureidoglycolate dehydrogenase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415050.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2H4TPI6
      Conserved Domains (1) summary
      PRK15025
      Location:1 → 349
      PRK15025; ureidoglycolate dehydrogenase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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