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    LINC00370 long intergenic non-protein coding RNA 370 [ Homo sapiens (human) ]

    Gene ID: 105370357, updated on 28-Oct-2024

    Summary

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    Official Symbol
    LINC00370provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 370provided by HGNC
    Primary source
    HGNC:HGNC:42692
    See related
    Ensembl:ENSG00000223617 AllianceGenome:HGNC:42692
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    LINC03061
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    Genomic context

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    See LINC00370 in Genome Data Viewer
    Location:
    13q33.3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (109281973..109297687)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (108509440..108525109)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (109934321..109950035)

    Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:109919619-109920577 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr13:109923095-109923823 Neighboring gene uncharacterized LOC130494219 Neighboring gene long intergenic non-protein coding RNA 3061 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:109985471-109985971 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr13:110001130-110002329 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:110021749-110022746 Neighboring gene uncharacterized LOC105370359 Neighboring gene long intergenic non-protein coding RNA 399 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:110076314-110076837 Neighboring gene heart enhancer 14 Neighboring gene ReSE screen-validated silencer GRCh37_chr13:110141574-110141689 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr13:110165798-110166997 Neighboring gene uncharacterized LOC107984602

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. LncRNA AL161431.1 predicts prognosis and drug response in head and neck squamous cell carcinoma. Zhou M, et al. Front Oncol, 2023. PMID 37397383, Free PMC Article
    2. LINC00370 modulates miR-222-3p-RGS4 axis to protect against osteoporosis progression. Li L, et al. Arch Gerontol Geriatr, 2021 Nov-Dec. PMID 34450404

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Other Names

    • long intergenic non-protein coding RNA 3061

    Clone Names

    • AL161431.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_170228.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL161431, AL583848
      Related
      ENST00000732278.1

    2. NR_170229.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL161431, AL583848
      Related
      ENST00000732277.1

    3. NR_170230.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL161431, AL583848

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

      Range
      109281973..109297687
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060937.1 Alternate T2T-CHM13v2.0

      Range
      108509440..108525109
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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