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    ybbP putative ABC transporter membrane subunit YbbP [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945118, updated on 17-Dec-2024

    Summary

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    Official Symbol
    ybbP
    Official Full Name
    putative ABC transporter membrane subunit YbbP
    Primary source
    ECOCYC:G6270
    Locus tag
    b0496
    See related
    ASAP:ABE-0001720
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0490
    Summary
    YbbP is a membrane component of a predicted ABC superfamily metabolite uptake transporter. [More information is available at EcoCyc: G6270].
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    Genomic context

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    Sequence:
    NC_000913.3 (520416..522830)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene chaperedoxin Neighboring gene NADP(+)-dependent aldehyde reductase YbbO Neighboring gene multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 Neighboring gene putative ABC transporter ATP-binding protein YbbA Neighboring gene protein RhsD Neighboring gene PF15631 family protein YbbC Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Getting in or out: early segregation between importers and exporters in the evolution of ATP-binding cassette (ABC) transporters. Saurin W, et al. J Mol Evol, 1999 Jan. PMID 9873074
    2. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative ABC transporter membrane subunit YbbP

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      520416..522830
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415029.1 putative ABC transporter membrane subunit YbbP [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415029.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X1MIC1, A0A6D0ID95
      Conserved Domains (1) summary
      COG3127
      Location:1 → 802
      YbbP; Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport and catabolism]
    Nucleotide Protein
    Heading Accession and Version

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