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    yciE DUF892 domain-containing protein YciE [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946871, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yciE
    Official Full Name
    DUF892 domain-containing protein YciE
    Primary source
    ECOCYC:EG11125
    Locus tag
    b1257
    See related
    ASAP:ABE-0004212
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1251
    Summary
    yciF and yciE are paralogs. [More information is available at EcoGene: EG11125]. Expression of YciE is induced under osmotic stress imposed by NaCl in both aerobic and anaerobic conditions and repressed by H-NS . [More information is available at EcoCyc: EG11125].
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    Genomic context

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    Sequence:
    NC_000913.3 (1314718..1315224, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative inner membrane protein Neighboring gene outer membrane protein W Neighboring gene DUF892 domain-containing protein YciF Neighboring gene stress-induced bacterial acidophilic repeat motifs-containing protein YciG

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression, crystallization and preliminary crystallographic analysis of YciE, a stress protein from Escherichia coli. Liu D, et al. Acta Crystallogr D Biol Crystallogr, 2004 Oct. PMID 15388941
    2. Molecular evolution of the Escherichia coli chromosome. I. Analysis of structure and natural variation in a previously uncharacterized region between trp and tonB. Stoltzfus A, et al. Genetics, 1988 Oct. PMID 3058546, Free PMC Article
    3. Function of the Escherichia coli nucleoid protein, H-NS: molecular analysis of a subset of proteins whose expression is enhanced in a hns deletion mutant. Yoshida T, et al. Mol Gen Genet, 1993 Feb. PMID 8455549
    4. Time-dependent proteome alterations under osmotic stress during aerobic and anaerobic growth in Escherichia coli. Weber A, et al. J Bacteriol, 2006 Oct. PMID 17015655, Free PMC Article
    5. A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map. Aiba H, et al. DNA Res, 1996 Dec 31. PMID 9097039

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. N-terminus verified by Edman degradation on complete protein
      Title: Function of the Escherichia coli nucleoid protein, H-NS: molecular analysis of a subset of proteins whose expression is enhanced in a hns deletion mutant.
    2. Expression, crystallization and preliminary crystallographic analysis of YciE
      Title: Expression, crystallization and preliminary crystallographic analysis of YciE, a stress protein from Escherichia coli.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    General protein information

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    Preferred Names
    DUF892 domain-containing protein YciE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1314718..1315224 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415773.1 DUF892 domain-containing protein YciE [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415773.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8T5YBB6
      Conserved Domains (1) summary
      COG3685
      Location:1 → 162
      YciE; Ferritin-like metal-binding protein YciE [Inorganic ion transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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