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    yphH putative DNA-binding transcriptional regulator, NAGC-like [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947023, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yphH
    Official Full Name
    putative DNA-binding transcriptional regulator, NAGC-like
    Primary source
    ECOCYC:G7344
    Locus tag
    b2550
    See related
    ASAP:ABE-0008384
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2547
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    Genomic context

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    Sequence:
    NC_000913.3 (2682863..2684056)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative ABC transporter periplasmic binding protein YphF Neighboring gene DUF5107 domain-containing protein YphG Neighboring gene serine hydroxymethyltransferase Neighboring gene nitric oxide dioxygenase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global analysis of candidate genes important for fitness in a competitive biofilm using DNA-array-based transposon mapping. Junker LM, et al. Microbiology (Reading), 2006 Aug. PMID 16849790
    2. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    3. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    4. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    putative DNA-binding transcriptional regulator, NAGC-like

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2682863..2684056
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417045.4 putative DNA-binding transcriptional regulator, NAGC-like [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417045.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376WUJ1
      Conserved Domains (1) summary
      COG1940
      Location:76 → 397
      NagC; Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain [Transcription, Carbohydrate transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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