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    hcxA hydroxycarboxylate dehydrogenase A [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945212, updated on 17-Dec-2024

    Summary

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    Official Symbol
    hcxA
    Official Full Name
    hydroxycarboxylate dehydrogenase A
    Primary source
    ECOCYC:EG12692
    Locus tag
    b0599
    See related
    ASAP:ABE-0002065
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0593; ybdH
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    Genomic context

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    Sequence:
    NC_000913.3 (632389..633477, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene pyruvate transporter CstA Neighboring gene PF04328 family protein YbdD Neighboring gene methionine transaminase Neighboring gene ParB-like nuclease domain-containing protein YbdM Neighboring gene putative PAPS reductase/DUF3440 domain-containing protein YbdN

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Detection of new genes in a bacterial genome using Markov models for three gene classes. Borodovsky M, et al. Nucleic Acids Res, 1995 Sep 11. PMID 7567469, Free PMC Article
    2. Global analysis of candidate genes important for fitness in a competitive biofilm using DNA-array-based transposon mapping. Junker LM, et al. Microbiology (Reading), 2006 Aug. PMID 16849790
    3. Genome-wide screening of genes required for swarming motility in Escherichia coli K-12. Inoue T, et al. J Bacteriol, 2007 Feb. PMID 17122336, Free PMC Article
    4. Nontargeted in vitro metabolomics for high-throughput identification of novel enzymes in Escherichia coli. Sévin DC, et al. Nat Methods, 2017 Feb. PMID 27941785
    5. Molecular and functional characterization of a carbon starvation gene of Escherichia coli. Schultz JE, et al. J Mol Biol, 1991 Mar 5. PMID 1848300

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables 2-hydroxyglutarate dehydrogenase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on CH-OH group of donors IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hydroxycarboxylate dehydrogenase A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      632389..633477 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415132.1 hydroxycarboxylate dehydrogenase A [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415132.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7R554
      Conserved Domains (1) summary
      PRK10586
      Location:1 → 362
      PRK10586; putative oxidoreductase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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