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    1810009J06Rik RIKEN cDNA 1810009J06 gene [ Mus musculus (house mouse) ]

    Gene ID: 73626, updated on 27-Nov-2024

    Summary

    Official Symbol
    1810009J06Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 1810009J06 geneprovided by MGI
    Primary source
    MGI:MGI:1920876
    See related
    Ensembl:ENSMUSG00000094808 AllianceGenome:MGI:1920876
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be active in extracellular space. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See 1810009J06Rik in Genome Data Viewer
    Location:
    6 B1; 6 19.02 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (40941706..40945361)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (40964772..40968427)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene T cell receptor beta chain Neighboring gene serine protease 59 Neighboring gene trypsinogen pseudogene Neighboring gene STARR-seq mESC enhancer starr_15692 Neighboring gene predicted gene 2663 Neighboring gene serine protease 3B

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in proteolysis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC73626
    Names
    trypsinogen 5
    NP_076196.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_006980.1 

      Range
      73978..77633
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_023707.3NP_076196.1  uncharacterized protein LOC73626 precursor

      See identical proteins and their annotated locations for NP_076196.1

      Status: VALIDATED

      Source sequence(s)
      AC161768
      Consensus CDS
      CCDS20042.1
      UniProtKB/TrEMBL
      Q7TT42, Q9CPN7
      Related
      ENSMUSP00000075935.6, ENSMUST00000076638.7
      Conserved Domains (2) summary
      smart00020
      Location:23240
      Tryp_SPc; Trypsin-like serine protease
      cd00190
      Location:24243
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      40941706..40945361
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)