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    Mrps33 mitochondrial ribosomal protein S33 [ Mus musculus (house mouse) ]

    Gene ID: 14548, updated on 9-Dec-2024

    Summary

    Official Symbol
    Mrps33provided by MGI
    Official Full Name
    mitochondrial ribosomal protein S33provided by MGI
    Primary source
    MGI:MGI:1338046
    See related
    Ensembl:ENSMUSG00000029918 AllianceGenome:MGI:1338046
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gdap3; PTD003; CGI-139; MRP-S33
    Summary
    Located in mitochondrion. Is expressed in several structures, including early conceptus; gonad; liver; salivary gland; and spleen. Orthologous to human MRPS33 (mitochondrial ribosomal protein S33). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 30.3), CNS E14 (RPKM 30.2) and 24 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Mrps33 in Genome Data Viewer
    Location:
    6 B1; 6 18.67 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (39778738..39787870, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (39801804..39810936, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene Braf transforming gene Neighboring gene predicted gene, 34389 Neighboring gene ferritin heavy chain, pseudogene 2 Neighboring gene STARR-seq mESC enhancer starr_15669 Neighboring gene STARR-seq mESC enhancer starr_15670 Neighboring gene STARR-seq mESC enhancer starr_15671 Neighboring gene STARR-positive B cell enhancer ABC_E6425 Neighboring gene predicted gene 7554 Neighboring gene aldolase A, fructose-bisphosphate pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from PubChem

    General protein information

    Preferred Names
    small ribosomal subunit protein mS33
    Names
    28S ribosomal protein S33, mitochondrial
    S33mt
    ganglioside-induced differentiation-associated-protein 3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001010930.1NP_001010930.1  small ribosomal subunit protein mS33 isoform 2

      See identical proteins and their annotated locations for NP_001010930.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) lacks a segment in the coding region, as compared to variant 1. The encoded isoform 2 has a shorter and distinct C-terminus.
      Source sequence(s)
      AI841153, BC028645, BU695761, BY296250
      Consensus CDS
      CCDS39464.1
      UniProtKB/TrEMBL
      Q8R2K5
      Related
      ENSMUSP00000110445.2, ENSMUST00000114797.2
      Conserved Domains (1) summary
      pfam08293
      Location:633
      MRP-S33; Mitochondrial ribosomal subunit S27
    2. NM_010270.2NP_034400.1  small ribosomal subunit protein mS33 isoform 1

      See identical proteins and their annotated locations for NP_034400.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) encodes the longer isoform (1).
      Source sequence(s)
      AI841153, AK019000, BU695761, BY296250
      Consensus CDS
      CCDS20026.1
      UniProtKB/Swiss-Prot
      O88743, Q9D2R8
      UniProtKB/TrEMBL
      Q58DZ5
      Related
      ENSMUSP00000031978.9, ENSMUST00000031978.9
      Conserved Domains (1) summary
      pfam08293
      Location:696
      MRP-S33; Mitochondrial ribosomal subunit S27

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      39778738..39787870 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)