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    yecE DUF72 domain-containing protein YecE [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946382, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yecE
    Official Full Name
    DUF72 domain-containing protein YecE
    Primary source
    ECOCYC:EG12379
    Locus tag
    b1868
    See related
    ASAP:ABE-0006233
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1869
    Summary
    The yecE gene is the site of integration for the lysogenic prophage 297 as well as for a prophage found in isolates of the sorbitol-fermenting enterohemorrhagic Escherichia coli strain O157:NM . [More information is available at EcoCyc: EG12379].
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    Genomic context

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    Sequence:
    NC_000913.3 (1951395..1952213)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene dihydroneopterin triphosphate diphosphatase Neighboring gene aspartate--tRNA ligase Neighboring gene isochorismatase family protein YecD Neighboring gene MAPEG family inner membrane protein YecN Neighboring gene carboxy-S-adenosyl-L-methionine synthase Neighboring gene tRNA U34 carboxymethyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Chromosomal dynamism in progeny of outbreak-related sorbitol-fermenting enterohemorrhagic Escherichia coli O157:NM. Bielaszewska M, et al. Appl Environ Microbiol, 2006 Mar. PMID 16517637, Free PMC Article
    2. The Shiga-toxin VT2-encoding bacteriophage varphi297 integrates at a distinct position in the Escherichia coli genome. De Greve H, et al. Biochim Biophys Acta, 2002 Dec 12. PMID 12427556
    3. Aspartyl-tRNA synthetase from Escherichia coli: cloning and characterisation of the gene, homologies of its translated amino acid sequence with asparaginyl- and lysyl-tRNA synthetases. Eriani G, et al. Nucleic Acids Res, 1990 Dec 11. PMID 2129559, Free PMC Article
    4. Insertion site occupancy by stx2 bacteriophages depends on the locus availability of the host strain chromosome. Serra-Moreno R, et al. J Bacteriol, 2007 Sep. PMID 17644594, Free PMC Article
    5. DNA microarray-based identification of genes controlled by autoinducer 2-stimulated quorum sensing in Escherichia coli. DeLisa MP, et al. J Bacteriol, 2001 Sep. PMID 11514505, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    DUF72 domain-containing protein YecE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1951395..1952213
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416382.1 DUF72 domain-containing protein YecE [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416382.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2W6NT98, A0A6N0IQF2, A0A793GM26
      Conserved Domains (1) summary
      PRK10302
      Location:1 → 272
      PRK10302; hypothetical protein; Provisional
    Nucleotide Protein
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