U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    yiiG DUF3829 domain-containing lipoprotein YiiG [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948392, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    yiiG
    Official Full Name
    DUF3829 domain-containing lipoprotein YiiG
    Primary source
    ECOCYC:EG11860
    Locus tag
    b3896
    See related
    ASAP:ABE-0012718
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3889
    Summary
    First 21 aa are a type II signal peptide. [More information is available at EcoGene: EG11860].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (4087002..4088057)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene formate dehydrogenase O subunit alpha Neighboring gene sulfurtransferase for molybdenum cofactor sulfuration Neighboring gene putative DNA-binding transcriptional regulator FrvR Neighboring gene peptidase M42 family protein FrvX Neighboring gene putative PTS enzyme IIBC component FrvB

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Analysis of the Escherichia coli genome. III. DNA sequence of the region from 87.2 to 89.2 minutes. Plunkett G 3rd, et al. Nucleic Acids Res, 1993 Jul 25. PMID 8346018, Free PMC Article
    2. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
    3. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    DUF3829 domain-containing lipoprotein YiiG

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4087002..4088057
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418332.1 DUF3829 domain-containing lipoprotein YiiG [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418332.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8T5YDL9
      Conserved Domains (1) summary
      pfam12889
      Location:72 → 349
      DUF3829; Protein of unknown function (DUF3829)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.