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    M01F1.9 Arrestin_N domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 3565369, updated on 9-Dec-2024

    Summary

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    Official Symbol
    M01F1.9
    Official Full Name
    Arrestin_N domain-containing protein
    Primary source
    WormBase:WBGene00010815
    Locus tag
    CELE_M01F1.9
    See related
    AllianceGenome:WB:WBGene00010815
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in retrograde transport, endosome to Golgi. Predicted to be located in cytosol. Predicted to be part of Ric1-Rgp1 guanyl-nucleotide exchange factor complex. Predicted to be active in Golgi membrane. Orthologous to human RGP1 (RGP1 homolog, RAB6A GEF complex partner 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See M01F1.9 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    6
    Sequence:
    Chromosome: III; NC_003281.10 (3493814..3499057, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene CRAL-TRIO domain-containing protein C34C12.6 Neighboring gene Uncharacterized protein Neighboring gene Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase Neighboring gene Lipoprotein;VWFD domain-containing protein Neighboring gene Large ribosomal subunit protein uL13

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in retrograde transport, endosome to Golgi IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in Golgi membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of Ric1-Rgp1 guanyl-nucleotide exchange factor complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Arrestin_N domain-containing protein
    NP_001022690.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      3493814..3499057 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001027519.7 → NP_001022690.2  Arrestin_N domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001022690.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7YWW8
      Conserved Domains (2) summary
      pfam08737
      Location:80 → 308
      Rgp1; Rgp1
      cl02844
      Location:2 → 151
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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