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    ylbE DUF1116 domain-containing protein YlbE [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 4056025, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ylbE
    Official Full Name
    DUF1116 domain-containing protein YlbE
    Primary source
    ECOCYC:G6288
    Locus tag
    b4572
    See related
    ASAP:ABE-0285105
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    b0519; b4507; ECK0512; G0-10554
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    Genomic context

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    Sequence:
    NC_000913.3 (548357..549616)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene ureidoglycolate dehydrogenase Neighboring gene putative oxamate carbamoyltransferase FdrA Neighboring gene DUF2877 domain-containing protein YlbF Neighboring gene putative carbamate kinase Neighboring gene 5-(carboxyamino)imidazole ribonucleotide synthase Neighboring gene N(5)-carboxyaminoimidazole ribonucleotide mutase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new Escherichia coli gene, fdrA, identified by suppression analysis of dominant negative FtsH mutations. Akiyama Y, et al. Mol Gen Genet, 1995 Nov 15. PMID 7500942
    2. New genes implicated in the protection of anaerobically grown Escherichia coli against nitric oxide. Justino MC, et al. J Biol Chem, 2005 Jan 28. PMID 15546870
    3. Multiple stressor-induced proteome responses of Escherichia coli BL21(DE3). Han KY, et al. J Proteome Res, 2008 May. PMID 18363324
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    DUF1116 domain-containing protein YlbE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      548357..549616
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009029994.1 DUF1116 domain-containing protein YlbE [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for YP_009029994.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7CK06
      Conserved Domains (1) summary
      pfam06545
      Location:87 → 302
      DUF1116; Protein of unknown function (DUF1116)
    Nucleotide Protein
    Heading Accession and Version

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