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    impC type VI secretion system protein ImpC [ Escherichia coli O157:H7 str. Sakai ]

    Gene ID: 914127, updated on 6-Oct-2023

    Summary

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    Gene symbol
    impC
    Gene description
    type VI secretion system protein ImpC
    Locus tag
    ECs_0231
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli O157:H7 str. Sakai (strain: Sakai, substrain: RIMD 0509952, serovar: O157:H7)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
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    Genomic context

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    Sequence:
    NC_002695.2 (261236..262627, complement)

    NC_002695.2Genomic Context describing neighboring genes Neighboring gene type VI secretion system protein ImpH Neighboring gene type VI secretion protein Neighboring gene type VI secretion protein Neighboring gene hypothetical protein Neighboring gene type VI secretion system protein ImpB

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002695.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655. Ohnishi M, et al. Syst Appl Microbiol, 2000 Oct. PMID 11108008
    2. Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak. Makino K, et al. Genes Genet Syst, 1999 Oct. PMID 10734605
    3. Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak. Yokoyama K, et al. Gene, 2000 Nov 27. PMID 11111050
    4. Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12. Hayashi T, et al. DNA Res, 2001 Feb 28. PMID 11258796

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    type VI secretion system protein ImpC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002695.2 Reference assembly

      Range
      261236..262627 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_308258.1 type VI secretion system protein ImpC [Escherichia coli O157:H7 str. Sakai]

      See identical proteins and their annotated locations for NP_308258.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376P135
      Conserved Domains (1) summary
      COG3517
      Location:3 → 463
      COG3517; Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport]
    Nucleotide Protein
    Heading Accession and Version

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