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    ybiI zinc finger domain-containing protein YbiI [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945434, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ybiI
    Official Full Name
    zinc finger domain-containing protein YbiI
    Primary source
    ECOCYC:EG12421
    Locus tag
    b0803
    See related
    ASAP:ABE-0002744
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0792
    Summary
    dksA and ybiI are paralogs. [More information is available at EcoGene: EG12421].
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    Genomic context

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    Sequence:
    NC_000913.3 (838190..838456, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene protein YbiE Neighboring gene DUF1471 domain-containing protein YbiJ Neighboring gene PKHD-type hydroxylase YbiX Neighboring gene iron catecholate outer membrane transporter Fiu

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structural analysis of the rhlE gene of Escherichia coli. Ohmori H. Jpn J Genet, 1994 Feb. PMID 8037924
    2. Global iron-dependent gene regulation in Escherichia coli. A new mechanism for iron homeostasis. McHugh JP, et al. J Biol Chem, 2003 Aug 8. PMID 12746439
    3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in positive regulation of secondary metabolite biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    zinc finger domain-containing protein YbiI

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      838190..838456 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415324.1 zinc finger domain-containing protein YbiI [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415324.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0AAP9MKS6
      Conserved Domains (1) summary
      PRK11019
      Location:1 → 88
      PRK11019; DksA/TraR family C4-type zinc finger protein
    Nucleotide Protein
    Heading Accession and Version

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