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    ydcK putative acyltransferase YdcK [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 944932, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ydcK
    Official Full Name
    putative acyltransferase YdcK
    Primary source
    ECOCYC:G6741
    Locus tag
    b1428
    See related
    ASAP:ABE-0004765
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1421
    Summary
    YdcK is is a hypothetical protein. [More information is available at EcoCyc: G6741].
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    Genomic context

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    Sequence:
    NC_000913.3 (1499469..1500449, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene glucans biosynthesis protein D Neighboring gene DUF465 domain-containing protein YdcH Neighboring gene ribosomal-protein-L12-serine N-acetyltransferase Neighboring gene tellurite resistance protein Neighboring gene tellurite methyltransferase Neighboring gene DUF3313 domain-containing lipoprotein YdcL

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The beta-barrel finder (BBF) program, allowing identification of outer membrane beta-barrel proteins encoded within prokaryotic genomes. Zhai Y, et al. Protein Sci, 2002 Sep. PMID 12192075, Free PMC Article
    2. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nucleotidyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative acyltransferase YdcK

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1499469..1500449 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415945.1 putative acyltransferase YdcK [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415945.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A377DSQ2
      Conserved Domains (3) summary
      cd00208
      Location:180 → 258
      LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...
      pfam18836
      Location:169 → 186
      B_solenoid_ydck; Beta solenoid repeat from YDCK
      cl00160
      Location:224 → 295
      LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...
    Nucleotide Protein
    Heading Accession and Version

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