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    gnd 6-phosphogluconate dehydrogenase, decarboxylating [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946554, updated on 3-Dec-2024

    Summary

    Official Symbol
    gnd
    Official Full Name
    6-phosphogluconate dehydrogenase, decarboxylating
    Primary source
    ECOCYC:EG10411
    Locus tag
    b2029
    See related
    ASAP:ABE-0006737
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2024
    Summary
    A null mutation in the gnd gene encoding 6-phosphogluconate dehydrogenase does not affect the growth rate significantly. [More information is available at EcoCyc: EG10411].
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    Genomic context

    Sequence:
    NC_000913.3 (2099862..2101268, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene O-antigen co-polymerase Neighboring gene UDP-glucose 6-dehydrogenase Neighboring gene pseudo Neighboring gene IS5 family transposase and trans-activator Neighboring gene putative glycosyltransferase WbbK Neighboring gene putative lipopolysaccharide biosynthesis O-acetyl transferase WbbJ

    Bibliography

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in D-gluconate catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within D-gluconate catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in D-gluconate metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in organic acid catabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in pentose-phosphate shunt IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in pentose-phosphate shunt IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in pentose-phosphate shunt, oxidative branch IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    6-phosphogluconate dehydrogenase, decarboxylating
    NP_416533.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2099862..2101268 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416533.1 6-phosphogluconate dehydrogenase, decarboxylating [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416533.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7EM28
      Conserved Domains (1) summary
      PRK09287
      Location:14468
      PRK09287; NADP-dependent phosphogluconate dehydrogenase