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    yjjJ toxin YjjJ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 944883, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yjjJ
    Official Full Name
    toxin YjjJ
    Primary source
    ECOCYC:EG12342
    Locus tag
    b4385
    See related
    ASAP:ABE-0014383
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4377
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    Genomic context

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    Sequence:
    NC_000913.3 (4621769..4623100)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene phosphopentomutase Neighboring gene purine nucleoside phosphorylase Neighboring gene lipoate--protein ligase A Neighboring gene putative inner membrane protein Smp

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. E. coli Toxin YjjJ (HipH) Is a Ser/Thr Protein Kinase That Impacts Cell Division, Carbon Metabolism, and Ribosome Assembly. Gratani FL, et al. mSystems, 2023 Feb 23. PMID 36537800, Free PMC Article
    2. Characterization of YjjJ toxin of Escherichia coli. Maeda Y, et al. FEMS Microbiol Lett, 2017 Jun 15. PMID 28430938
    3. Analysis of the terminator region after the deoCABD operon of Escherichia coli K-12 using a new class of single copy number operon-fusion vectors. Larsen JE, et al. Nucleic Acids Res, 1987 Jul 10. PMID 3299264, Free PMC Article
    4. From the genome sequence to the proteome and back: evaluation of E. coli genome annotation with a 2-D gel-based proteomics approach. Maillet I, et al. Proteomics, 2007 Apr. PMID 17366475
    5. Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea. Pérez-Rueda E, et al. Comput Biol Chem, 2004 Dec. PMID 15556475

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables toxin activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in modulation of process of another organism IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    toxin YjjJ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4621769..4623100
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418802.1 toxin YjjJ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418802.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A444R3K5
      Conserved Domains (1) summary
      PRK09775
      Location:1 → 439
      PRK09775; type II toxin-antitoxin system HipA family toxin YjjJ
    Nucleotide Protein
    Heading Accession and Version

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